RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TMEM225BP0DP42 221 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 RAB3AP20336 220 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 P2RX3P56373 397 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 LGALS4P56470 323 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 ZP1P60852 638 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 MEF2CQ06413 473 aaPredicted RBP14.42□□□□□ -0.1
ITGB1-215ENST00000488494 KISS1Q15726 138 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 LRRC75BQ2VPJ9 315 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 RPL22L1Q6P5R6 122 aaKnown RBP14.42□□□□□ -0.1
ITGB1-215ENST00000488494 OR51A2Q8NGJ7 313 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 RPS4Y2Q8TD47 263 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 SSX3Q99909 188 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 TAS2R4Q9NYW5 299 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 EXOSC1Q9Y3B2 195 aaKnown RBP14.42□□□□□ -0.1
ITGB1-215ENST00000488494 LINC00312Q9Y6C7 94 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 SH2D1BO14796 132 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 ARG1P05089 322 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 GNAO1P09471 354 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 CCDC58Q4VC31 144 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 OGFRL1Q5TC84 451 aaPredicted RBP14.41□□□□□ -0.1
ITGB1-215ENST00000488494 ASPHD2Q6ICH7 369 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 BRICD5Q6PL45 260 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 Q6ZSV7 163 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 LHFPL4Q7Z7J7 247 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 TRAPPC6BQ86SZ2 158 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 OR13D1Q8NGV5 346 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 LINC01006Q8NI28 216 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 GPR148Q8TDV2 347 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 PPA2Q9H2U2 334 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 CLEC2DQ9UHP7 191 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 RNF114Q9Y508 228 aa14.41□□□□□ -0.1
ITGB1-215ENST00000488494 ODF3BA8MYP8 253 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 GABRPO00591 440 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 CLPXO76031 633 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 ALX3O95076 343 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 ZNF44P15621 663 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 CAPGP40121 348 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 SCN1BQ07699 218 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 LY6EQ16553 131 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 PLA1AQ53H76 456 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 ZNF529Q6P280 563 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 PPP1R35Q8TAP8 253 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 SMIM19Q96E16 107 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 CPNE2Q96FN4 548 aaPredicted RBP14.4□□□□□ -0.1
ITGB1-215ENST00000488494 TMEM80Q96HE8 168 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 NKX3-1Q99801 234 aaPredicted RBP14.4□□□□□ -0.1
ITGB1-215ENST00000488494 FAM192AQ9GZU8 254 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 ZNF696Q9H7X3 374 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 RHOFQ9HBH0 211 aa14.4□□□□□ -0.1
ITGB1-215ENST00000488494 SIRT4Q9Y6E7 314 aaPredicted RBP14.4□□□□□ -0.1
ITGB1-215ENST00000488494 DSCAML1Q8TD84 2053 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 CASQ2O14958 399 aaPredicted RBP14.39□□□□□ -0.11
ITGB1-215ENST00000488494 MAGEB3O15480 346 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 LALBAP00709 142 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 CD2P06729 351 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 TGFBR2P37173 567 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 DYNC1I2Q13409 638 aaKnown RBP14.39□□□□□ -0.11
ITGB1-215ENST00000488494 MED21Q13503 144 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 ZNF626Q68DY1 528 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 SATL1Q86VE3 508 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 C8orf59Q8N0T1 100 aaPredicted RBP14.39□□□□□ -0.11
ITGB1-215ENST00000488494 OR13C5Q8NGS8 318 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 OR52N1Q8NH53 320 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 TNFAIP8L1Q8WVP5 186 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 TMEM106AQ96A25 262 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 FOXRED1Q96CU9 486 aaPredicted RBP14.39□□□□□ -0.11
ITGB1-215ENST00000488494 GPER1Q99527 375 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 MEGF9Q9H1U4 602 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 BABAM2Q9NXR7 383 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 SESN1Q9Y6P5 492 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 TRRAPQ9Y4A5 3859 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 VWFP04275 2813 aa14.39□□□□□ -0.11
ITGB1-215ENST00000488494 TRGV10A0A0A0MS01 117 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 SLC33A1O00400 549 aaPredicted RBP14.38□□□□□ -0.11
ITGB1-215ENST00000488494 ERP29P30040 261 aaKnown RBP14.38□□□□□ -0.11
ITGB1-215ENST00000488494 PROK1P58294 105 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 PPP3R1P63098 170 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 ATXN7L3Q14CW9 347 aaPredicted RBP14.38□□□□□ -0.11
ITGB1-215ENST00000488494 AANATQ16613 207 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 PRAMEF5Q5TYX0 476 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 Q6P435 159 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 DYNAPQ8N1N2 210 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 ZFP41Q8N8Y5 198 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 CHST4Q8NCG5 386 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 OR11H6Q8NGC7 330 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 GGHQ92820 318 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 CITED1Q99966 193 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 VCXQ9H320 206 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 C16orf95Q9H693 158 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 CHCHD3Q9NX63 227 aaKnown RBP14.38□□□□□ -0.11
ITGB1-215ENST00000488494 TBL2Q9Y4P3 447 aaKnown RBP14.38□□□□□ -0.11
ITGB1-215ENST00000488494 HSPE1-MOB4S4R3N1 261 aa14.38□□□□□ -0.11
ITGB1-215ENST00000488494 IGHV2-26A0A0B4J1V2 119 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 A0A0G2JK05 382 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 EFCAB10A6NFE3 127 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 FAM90A8PA6NJQ4 464 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 HSPB6O14558 160 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 OGG1O15527 345 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 XPNPEP2O43895 674 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 OR3A4PP47883 348 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms