RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 OR1L6Q8NGR2 347 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR2V1Q8NHB1 315 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 OTOSQ8NHW6 89 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 ADAMTS18Q8TE60 1221 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 GRHL3Q8TE85 626 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 WBP2Q969T9 261 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 P2RX4Q99571 388 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 GABRG3Q99928 467 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 PTPN18Q99952 460 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 ELOVL1Q9BW60 279 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 TBL1XR1Q9BZK7 514 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 C11orf1Q9H5F2 150 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 MKKSQ9NPJ1 570 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 DECR2Q9NUI1 292 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 HSPB7Q9UBY9 170 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 SH3BGRL2Q9UJC5 107 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 RNF150Q9ULK6 438 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 HSF4Q9ULV5 492 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 SLC45A2Q9UMX9 530 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 MRPS2Q9Y399 296 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 COX11Q9Y6N1 276 aa4.13□□□□□ -1.75
CDC42BPA-213ENST00000488131 HEATR5BQ9P2D3 2071 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 FANCMQ8IYD8 2048 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 TCF20Q9UGU0 1960 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 IGHV2OR16-5A0A0B4J2B6 119 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 FEZF1A0PJY2 475 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 OTOL1A6NHN0 477 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 CRYM-AS1A6NIL9 109 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 SRSF10O75494 262 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR2J2O76002 312 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 HRASP01112 189 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 CTSDP07339 412 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR5G3P0C626 314 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 BCL2P10415 239 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 HIST1H1DP16402 221 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 CEBPBP17676 345 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 DTYMKP23919 212 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 ATP6V0CP27449 155 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 CTRLP40313 264 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 WNT5AP41221 380 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 TFPI2P48307 235 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 CNN1P51911 297 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 EFNA3P52797 238 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 GNB2P62879 340 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 LCN2P80188 198 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 ENDOGQ14249 297 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 GPR18Q14330 331 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 FHL5Q5TD97 284 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF880Q6PDB4 577 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 FAM180AQ6UWF9 173 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 AMZ2Q86W34 360 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 NRSN1Q8IZ57 195 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 FBXL14Q8N1E6 418 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 LRRC25Q8N386 305 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR5H2Q8NGV7 314 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR6N2Q8NGY6 317 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR2AJ1Q8NGZ0 328 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 GNPNAT1Q96EK6 184 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 SMIM12Q96EX1 92 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 SLC25A44Q96H78 314 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 BTF3L4Q96K17 158 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF514Q96K75 400 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 IL17FQ96PD4 163 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 MS4A10Q96PG2 267 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 AMELYQ99218 206 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 LPAR4Q99677 370 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 LYRM2Q9NU23 88 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 TMEM106BQ9NUM4 274 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 OR6C3Q9NZP0 311 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF581Q9P0T4 197 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF319Q9P2F9 582 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 LAMP3Q9UQV4 416 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 LSM5Q9Y4Y9 91 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 ZNF780BQ9Y6R6 833 aa4.12□□□□□ -1.75
CDC42BPA-213ENST00000488131 TRAV30A0A087WSZ9 112 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MAP1LC3B2A6NCE7 125 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 PROB1E7EW31 1015 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 WDR1O75083 606 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 PNPP00491 289 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 IGHEP01854 428 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 C8orf89P0DMQ9 161 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 HOXB2P14652 356 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 GNB3P16520 340 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 TCN2P20062 427 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 GZMHP20718 246 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 MDKP21741 143 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SFTPDP35247 375 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 SRP14P37108 136 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 TM4SF4P48230 202 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 CCR5P51681 352 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RAB38P57729 211 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RPL15P61313 204 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RPL23AP62750 156 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 PAFAH1B2P68402 229 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RHOGP84095 191 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 RPL19P84098 196 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 EWSR1Q01844 656 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 FAM189A2Q15884 450 aa4.11□□□□□ -1.75
CDC42BPA-213ENST00000488131 LRRC73Q5JTD7 316 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms