RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FAM219AQ8IW50 185 aa22.51■■□□□ 1.19
HLA-C-208ENST00000487245 FOXRED2Q8IWF2 684 aa22.51■■□□□ 1.19
HLA-C-208ENST00000487245 HRH4Q9H3N8 390 aa22.51■■□□□ 1.19
HLA-C-208ENST00000487245 ST3GAL6Q9Y274 331 aa22.51■■□□□ 1.19
HLA-C-208ENST00000487245 KMT2EQ8IZD2 1858 aa22.51■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A10PA6NDY2 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A18PA6NE21 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A16PA6NEW6 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A20PA6NIJ5 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A8PA6NJQ4 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A7PA6NKC0 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A22PA8MWA6 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A12PA8MX19 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A5PA8MXJ8 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A23PA8MXZ1 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 NME2P1O60361 137 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 CD5P06127 495 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A15PP0C7V4 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A13PP0C7W8 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A14PP0C7W9 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 FAM90A24PP0C7X0 464 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 MUC1P15941 1255 aaPredicted RBP22.5■■□□□ 1.19
HLA-C-208ENST00000487245 NME2P22392 152 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 ARR3P36575 388 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 RBM11P57052 281 aaKnown RBP22.5■■□□□ 1.19
HLA-C-208ENST00000487245 TMEM33P57088 247 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 HFEQ30201 348 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 SLC22A25Q6T423 547 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 APH1AQ96BI3 265 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 SYT3Q9BQG1 590 aa22.5■■□□□ 1.19
HLA-C-208ENST00000487245 REPIN1Q9BWE0 567 aaKnown RBP22.5■■□□□ 1.19
HLA-C-208ENST00000487245 OR5AC1P0C628 307 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 MEOX1P50221 254 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 PRSS12P56730 875 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 HES3Q5TGS1 186 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 GPR157Q5UAW9 335 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 DHRS13Q6UX07 377 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 MDS2Q8NDY4 140 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 TOMM40LQ969M1 308 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 RSRP1Q9BUV0 290 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 PLSCR2Q9NRY7 297 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 PLA2G2EQ9NZK7 142 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 STARD10Q9Y365 291 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 PRELID3BQ9Y3B1 194 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 LSM5Q9Y4Y9 91 aaKnown RBP22.49■■□□□ 1.19
HLA-C-208ENST00000487245 PRSS44E7EML9 344 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 RNASEK-C17orf49H0YIS7 233 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 FBXO24O75426 580 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 MBPP02686 304 aaPredicted RBP22.49■■□□□ 1.19
HLA-C-208ENST00000487245 F2RL1P55085 397 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 Q6ZS49 121 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 MCEMP1Q8IX19 187 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 LGI3Q8N145 548 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 APOBEC3DQ96AK3 386 aaPredicted RBP22.49■■□□□ 1.19
HLA-C-208ENST00000487245 MSI2Q96DH6 328 aaKnown RBP22.49■■□□□ 1.19
HLA-C-208ENST00000487245 TMEM9BQ9NQ34 198 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 SLC2A9Q9NRM0 540 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 IL17BQ9UHF5 180 aa22.49■■□□□ 1.19
HLA-C-208ENST00000487245 HEXAP06865 529 aa22.48■■□□□ 1.19
HLA-C-208ENST00000487245 ZNF806P0C7X5 589 aa22.48■■□□□ 1.19
HLA-C-208ENST00000487245 FUT3P21217 361 aa22.48■■□□□ 1.19
HLA-C-208ENST00000487245 GLP1RP43220 463 aa22.48■■□□□ 1.19
HLA-C-208ENST00000487245 SRSF7Q16629 238 aaKnown RBP eCLIP22.48■■□□□ 1.19
HLA-C-208ENST00000487245 SAXO1Q8IYX7 474 aa22.48■■□□□ 1.19
HLA-C-208ENST00000487245 CCDC71LQ8N9Z2 235 aa22.48■■□□□ 1.19
HLA-C-208ENST00000487245 H7C2Y5 167 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 GPR137BO60478 399 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 DPPA2Q7Z7J5 298 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 OPA3Q9H6K4 179 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 CNTRLQ7Z7A1 2325 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 COL6A3P12111 3177 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 A0A096LPE4 126 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 A0A1W2PPZ6 126 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 CD46P15529 392 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 DUSP1P28562 367 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 IL13RA2Q14627 380 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 SLC10A1Q14973 349 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 DYRK2Q92630 601 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 TMEM231Q9H6L2 316 aa22.47■■□□□ 1.19
HLA-C-208ENST00000487245 MRPL21Q7Z2W9 205 aaKnown RBP22.46■■□□□ 1.19
HLA-C-208ENST00000487245 ZNF611Q8N823 705 aa22.46■■□□□ 1.19
HLA-C-208ENST00000487245 OR10Z1Q8NGY1 313 aa22.46■■□□□ 1.19
HLA-C-208ENST00000487245 FAM96BQ9Y3D0 163 aa22.46■■□□□ 1.19
HLA-C-208ENST00000487245 PQLC2LA1A4F0 135 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 HLA-HP01893 362 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 SEC11BP0C7V7 166 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 P2RY1P47900 373 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 PLP2Q04941 152 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 DAZAP2Q15038 168 aaPredicted RBP22.45■■□□□ 1.19
HLA-C-208ENST00000487245 SP6Q3SY56 376 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 C9orf135Q5VTT2 229 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 FAM185AQ8N0U4 392 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 COMMD1Q8N668 190 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 OR56B2PQ8NGI1 322 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 GLYATL2Q8WU03 294 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 FBXO9Q9UK97 447 aaPredicted RBP22.45■■□□□ 1.19
HLA-C-208ENST00000487245 TMED3Q9Y3Q3 217 aa22.45■■□□□ 1.19
HLA-C-208ENST00000487245 KLF2Q9Y5W3 355 aaPredicted RBP22.45■■□□□ 1.19
HLA-C-208ENST00000487245 C5orf49A4QMS7 147 aa22.45■■□□□ 1.18
HLA-C-208ENST00000487245 GLAP06280 429 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms