RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ZNF727A8MUV8 499 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 CDRT15L2A8MXV6 281 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 TP53I11O14683 189 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 HSD17B6O14756 317 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 TOX3O15405 576 aaPredicted RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 SYNGR3O43761 229 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 YIF1AO95070 293 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 NRASP01111 189 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 SRP19P09132 144 aaKnown RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 CDX1P47902 265 aaPredicted RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 LBX1P52954 281 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 PRSS12P56730 875 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 RND3P61587 244 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 SRPXP78539 464 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 MRPS34P82930 218 aaKnown RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 RAB35Q15286 201 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 Q6ZPA2 131 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 ZIC4Q8N9L1 334 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 SLAMF9Q96A28 289 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 PLEKHF2Q9H8W4 249 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 ST3GAL6Q9Y274 331 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 ABCA7Q8IZY2 2146 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 CEP192Q8TEP8 1941 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 A0A087WWC5 75 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 GATCO43716 136 aaKnown RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 PDCD6O75340 191 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 PPYP01298 95 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 NKX2-1P43699 371 aaPredicted RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 MALLQ13021 153 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 OR8B8Q15620 311 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 CDCP2Q5VXM1 449 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF385CQ66K41 422 aaPredicted RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 TMEM42Q69YG0 159 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 SP5Q6BEB4 398 aaPredicted RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 TMEM211Q6ICI0 200 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 NAXEQ8NCW5 288 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 TMEM222Q9H0R3 208 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 KIAA1456Q9P272 454 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 C19orf25Q9UFG5 118 aaPredicted RBP10.56□□□□□ -0.72
COL3A1-206ENST00000487010 MMP24Q9Y5R2 645 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 CCDC85CA6NKD9 419 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 IFITM10A6NMD0 228 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 HSPA12AO43301 675 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 ONECUT2O95948 504 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 LCATP04180 440 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 TCN2P20062 427 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 PDCD1Q15116 288 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 HAGHQ16775 308 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF774Q6NX45 483 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 FAM185AQ8N0U4 392 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 TMEM252Q8N6L7 170 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 SUMF1Q8NBK3 374 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 OR1F12Q8NHA8 337 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 TMEM171Q8WVE6 324 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 PAPOLGQ9BWT3 736 aaKnown RBP10.55□□□□□ -0.72
COL3A1-206ENST00000487010 SLC25A31Q9H0C2 315 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
COL3A1-206ENST00000487010 LYRM2Q9NU23 88 aaPredicted RBP10.55□□□□□ -0.72
COL3A1-206ENST00000487010 PTRH2Q9Y3E5 179 aaKnown RBP10.55□□□□□ -0.72
COL3A1-206ENST00000487010 PROB1E7EW31 1015 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 WRBO00258 174 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 OMGP23515 440 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 NDUFA6P56556 154 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 UBE2KP61086 200 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ELOBQ15370 118 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 EXT1Q16394 746 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 OR2B11Q5JQS5 317 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 RAET1LQ5VY80 246 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 SPIN2AQ99865 258 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 SPIN2BQ9BPZ2 258 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF700Q9H0M5 742 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 RARRES3Q9UL19 164 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 TCFL5Q9UL49 500 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 LIPGQ9Y5X9 500 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 SHANK1Q9Y566 2161 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF729A6NN14 1252 aaPredicted RBP10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF732B4DXR9 585 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 H0YL77 283 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 SSSCA1O60232 199 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 CXCL1P09341 107 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 GNRHRP30968 328 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 FUT6P51993 359 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 RBM11P57052 281 aaKnown RBP10.54□□□□□ -0.72
COL3A1-206ENST00000487010 DLK1P80370 383 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ICAM4Q14773 271 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF506Q5JVG8 444 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 DPPA2Q7Z7J5 298 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF429Q86V71 674 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 SELENOHQ8IZQ5 122 aaKnown RBP10.54□□□□□ -0.72
COL3A1-206ENST00000487010 GPR137CQ8N3F9 429 aa10.54□□□□□ -0.72
COL3A1-206ENST00000487010 Q8WTZ3 238 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms