RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MUC20Q8N307 709 aaPredicted RBP7.99□□□□□ -1.13
MCF2L-227ENST00000486806 CHST4Q8NCG5 386 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 DEFB108BQ8NET1 73 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 OR56B1Q8NGI3 324 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 RAB40AQ8WXH6 277 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 FAM168AQ92567 244 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 RAB1CQ92928 201 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 CYYR1Q96J86 154 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 GAFA1Q96PS6 74 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 GAL3ST1Q99999 423 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 TMEM246Q9BRR3 403 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 PIMREGQ9BSJ6 248 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 KAAG1Q9UBP8 84 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 CTSZQ9UBR2 303 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 DUX4Q9UBX2 424 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 METRNQ9UJH8 293 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 USF3Q68DE3 2245 aa7.99□□□□□ -1.13
MCF2L-227ENST00000486806 POLQO75417 2590 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 A0A096LNT2 108 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 TMEM82A0PJX8 343 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 ISPDA4D126 451 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 METTL21EPA6NDL7 271 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 NKX6-3A6NJ46 265 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 F5H0A9 414 aaPredicted RBP7.98□□□□□ -1.13
MCF2L-227ENST00000486806 SLC33A1O00400 549 aaPredicted RBP7.98□□□□□ -1.13
MCF2L-227ENST00000486806 MFNGO00587 321 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 SOCS1O15524 211 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 NDUFA2O43678 99 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 PSPNO60542 156 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 PDCD6O75340 191 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 FCN3O75636 299 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 SCGNO76038 276 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 CHRM2P08172 466 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 SELLP14151 372 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 CDK2P24941 298 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 PRDX2P32119 198 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 NR4A2P43354 598 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 VEGFCP49767 419 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 TMEM50BP56557 158 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 COL10A1Q03692 680 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 PDCD1Q15116 288 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 CLEC12BQ2HXU8 276 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 PLAC9Q5JTB6 97 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 Q5PR19 223 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 RAB12Q6IQ22 244 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 C17orf107Q6ZR85 190 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 ZNF561Q8N587 486 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 SPICQ8N5J4 248 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 FAM216BQ8N7L0 139 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 OR5T2Q8NGG2 359 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 OR6Q1Q8NGQ2 317 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 OR10R2Q8NGX6 335 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 FOXC2Q99958 501 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 ATG5Q9H1Y0 275 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 SPACA1Q9HBV2 294 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 OR14J1Q9UGF5 321 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 GLS2Q9UI32 602 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 HSF4Q9ULV5 492 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 MAB21L2Q9Y586 359 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 PEX16Q9Y5Y5 336 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 AKAP6Q13023 2319 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 CHD3Q12873 2000 aaKnown RBP7.98□□□□□ -1.13
MCF2L-227ENST00000486806 SPG11Q96JI7 2443 aa7.98□□□□□ -1.13
MCF2L-227ENST00000486806 PDZD2O15018 2839 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 SIRPB1O00241 398 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 SH2D1BO14796 132 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 DEGS1O15121 323 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 TMPRSS2O15393 492 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 RGS5O15539 181 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 XRCC3O43542 346 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 CSN2P05814 226 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 ZNF44P15621 663 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 SLC25A16P16260 332 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 HIST1H1DP16402 221 aaKnown RBP7.97□□□□□ -1.13
MCF2L-227ENST00000486806 BLVRBP30043 206 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-227ENST00000486806 MNDAP41218 407 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 OR3A1P47881 315 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 PITPNBP48739 271 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 IL13RA1P78552 427 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 PAX5Q02548 391 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 SHEQ5VZ18 495 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 CNIH2Q6PI25 160 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 LYPD2Q6UXB3 125 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 LINC00299Q6ZSB3 139 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 C6orf201Q7Z4U5 140 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 CCDC190Q86UF4 302 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 SUMF2Q8NBJ7 301 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 OR4M1Q8NGD0 313 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 ST8SIA4Q92187 359 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 ARHGAP5-AS1Q96IT6 56 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 CCL13Q99616 98 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 SOSTQ9BQB4 213 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 DPCDQ9BVM2 203 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-227ENST00000486806 SHARPINQ9H0F6 387 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 FAM234AQ9H0X4 552 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.97□□□□□ -1.13
MCF2L-227ENST00000486806 ADAM30Q9UKF2 790 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 KCNK7Q9Y2U2 307 aa7.97□□□□□ -1.13
MCF2L-227ENST00000486806 DYSFO75923 2080 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms