RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SPAM1P38567 509 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 RAB25P57735 213 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 FMODQ06828 376 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 ANGPT1Q15389 498 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 TMEM241Q24JQ0 296 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 BSXQ3C1V8 233 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 AHSA2Q719I0 299 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 PAGE2Q7Z2X7 111 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 TMEM144Q7Z5S9 345 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 C10orf107Q8IVU9 208 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 SYCE1Q8N0S2 351 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 ZFP62Q8NB50 900 aaPredicted RBP2.41□□□□□ -2.02
SMC4-218ENST00000486711 C2orf15Q8WU43 125 aaKnown RBP2.41□□□□□ -2.02
SMC4-218ENST00000486711 TMIGD2Q96BF3 282 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 BIRC8Q96P09 236 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 SHANK2-AS3Q9BTD1 123 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 LHX5Q9H2C1 402 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 VSIRQ9H7M9 311 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 IFT46Q9NQC8 304 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 TAS2R1Q9NYW7 299 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 CYB5R1Q9UHQ9 305 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 TRAPPC1Q9Y5R8 145 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 COL27A1Q8IZC6 1860 aaPredicted RBP2.41□□□□□ -2.02
SMC4-218ENST00000486711 IGKV2-24A0A0C4DH68 120 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 PGPA6NDG6 321 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 LEUTXA8MZ59 168 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 F8VP50 259 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 I3L4J1 428 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 MYO1DO94832 1006 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 FSTL3O95633 263 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 SOD3P08294 240 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 SLC2A1P11166 492 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 MAGEA3P43357 314 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 LGALS7P47929 136 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 CLEC18BQ6UXF7 455 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 Q6ZT83 130 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 TPGS1Q6ZTW0 290 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 ACBD4Q8NC06 268 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 OR8S1Q8NH09 359 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 CASTOR1Q8WTX7 329 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 CCL17Q92583 94 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 ANGPTL4Q9BY76 406 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 PLA2G12AQ9BZM1 189 aa2.4□□□□□ -2.03
SMC4-218ENST00000486711 MRM2Q9UI43 246 aaKnown RBP2.4□□□□□ -2.03
SMC4-218ENST00000486711 A0A1B0GXF2 115 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 A0A1W2PRG6 482 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 H3BP45 60 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 FABP7O15540 132 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 CRXO43186 299 aaPredicted RBP2.39□□□□□ -2.03
SMC4-218ENST00000486711 IGHG2P01859 326 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 M6PRP20645 277 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 ZNF83P51522 516 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 HBG1P69891 147 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 HBG2P69892 147 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 BAXQ07812 192 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 ENDOGQ14249 297 aaKnown RBP2.39□□□□□ -2.03
SMC4-218ENST00000486711 FLOT2Q14254 428 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 GOLGA7BQ2TAP0 167 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 CEACAM21Q3KPI0 293 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 GLYATQ6IB77 296 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 ERICH5Q6P6B1 374 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 COPS6Q7L5N1 327 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 MRPL52Q86TS9 123 aaKnown RBP2.39□□□□□ -2.03
SMC4-218ENST00000486711 AMN1Q8IY45 258 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 OR4C13Q8NGP0 309 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 OR2Y1Q8NGV0 311 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 OR2AE1Q8NHA4 323 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 OR2V2Q96R30 315 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 CYTH2Q99418 400 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 ULBP1Q9BZM6 244 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 POMKQ9H5K3 350 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 TRIM45Q9H8W5 580 aaPredicted RBP2.39□□□□□ -2.03
SMC4-218ENST00000486711 TREM1Q9NP99 234 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 MAT2BQ9NZL9 334 aa2.39□□□□□ -2.03
SMC4-218ENST00000486711 SETD1AO15047 1707 aaKnown RBP2.39□□□□□ -2.03
SMC4-218ENST00000486711 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.39□□□□□ -2.03
SMC4-218ENST00000486711 TRAV8-3A0A0A6YYJ7 113 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 ERICH4A6NGS2 130 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 HSBP1L1C9JCN9 74 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 CDIPTO14735 213 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 FFAR1O14842 300 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 NEMFO60524 1076 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 SHOX2O60902 331 aaPredicted RBP2.38□□□□□ -2.03
SMC4-218ENST00000486711 SNAP29O95721 258 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 CBX5P45973 191 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 CD164Q04900 197 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 BAMBIQ13145 260 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 LDLRAD2Q5SZI1 272 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 NXNL2Q5VZ03 156 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 LAMTOR1Q6IAA8 161 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 DPPA2Q7Z7J5 298 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 LINC00304Q8N9R0 145 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 OR2K2Q8NGT1 345 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 PHF10Q8WUB8 498 aaKnown RBP2.38□□□□□ -2.03
SMC4-218ENST00000486711 ZBED3Q96IU2 234 aaPredicted RBP2.38□□□□□ -2.03
SMC4-218ENST00000486711 SERPINB11Q96P15 392 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 SUCNR1Q9BXA5 334 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 DSN1Q9H410 356 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 RHOFQ9HBH0 211 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 RBM12B-AS1Q9P1G2 102 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms