RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SLC15A1P46059 708 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 ZP1P60852 638 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 RBM39Q14498 530 aaKnown RBP6.26□□□□□ -1.41
XRN1-212ENST00000486211 AGKQ53H12 422 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 TEX30Q5JUR7 227 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 OR51L1Q8NGJ5 315 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 TRMT10AQ8TBZ6 339 aaKnown RBP6.26□□□□□ -1.41
XRN1-212ENST00000486211 RNF133Q8WVZ7 376 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 RPEQ96AT9 228 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 PGAM5Q96HS1 289 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 TPD52L3Q96J77 140 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 LRGUKQ96M69 825 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 MNTQ99583 582 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 TOLLIPQ9H0E2 274 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 PLSCR3Q9NRY6 295 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 PRR13Q9NZ81 148 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 F8VVB4 439 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 F8VWA3 439 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 MPZP25189 248 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 OPRL1P41146 370 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 HAAOP46952 286 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 PRRX1P54821 245 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 SELENOWP63302 87 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 EPGNQ6UW88 154 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 VTCN1Q7Z7D3 282 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 ZNF575Q86XF7 245 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 ANKRD13BQ86YJ7 626 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 PROKR2Q8NFJ6 384 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 AMELYQ99218 206 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 OVOL2Q9BRP0 275 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 CHST6Q9GZX3 395 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 OR52D1Q9H346 318 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 ANKRD19PQ9H560 264 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 RABEP2Q9H5N1 569 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 PLEKHA3Q9HB20 300 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 CHCHD3Q9NX63 227 aaKnown RBP6.25□□□□□ -1.41
XRN1-212ENST00000486211 SIGLEC8Q9NYZ4 499 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 POLDIP2Q9Y2S7 368 aa6.25□□□□□ -1.41
XRN1-212ENST00000486211 PQLC2LA1A4F0 135 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 FAM90A10PA6NDY2 464 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 NCBP2LA6PVI3 153 aaKnown RBP6.24□□□□□ -1.41
XRN1-212ENST00000486211 RGS11O94810 467 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 IFNA14P01570 189 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 APOC1P02654 83 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 LGALS1P09382 135 aaKnown RBP6.24□□□□□ -1.41
XRN1-212ENST00000486211 ERP29P30040 261 aaKnown RBP6.24□□□□□ -1.41
XRN1-212ENST00000486211 SLC6A6P31641 620 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 KDELR2P33947 212 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 RAB9AP51151 201 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 P2RX3P56373 397 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.24□□□□□ -1.41
XRN1-212ENST00000486211 GRK1Q15835 563 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 KRT71Q3SY84 523 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 LRRC23Q53EV4 343 aaPredicted RBP6.24□□□□□ -1.41
XRN1-212ENST00000486211 SLC35F1Q5T1Q4 408 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 PLCXD3Q63HM9 321 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 MOB3CQ70IA8 216 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 RRM2BQ7LG56 351 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 TRAPPC6BQ86SZ2 158 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 GTSCR1Q86UQ5 136 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 ZNF573Q86YE8 665 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 OR8H3Q8N146 312 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 RNF148Q8N7C7 305 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 OR8B12Q8NGG6 310 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 OR2T4Q8NH00 348 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 FANK1Q8TC84 345 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 CORO2AQ92828 525 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 ABHD6Q9BV23 337 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 TMEM120AQ9BXJ8 343 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 ROPN1BQ9BZX4 212 aaPredicted RBP6.24□□□□□ -1.41
XRN1-212ENST00000486211 GAL3ST2Q9H3Q3 398 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 ROPN1Q9HAT0 212 aaPredicted RBP6.24□□□□□ -1.41
XRN1-212ENST00000486211 ERVK13-1Q9NX77 482 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.24□□□□□ -1.41
XRN1-212ENST00000486211 SLC7A11Q9UPY5 501 aa6.24□□□□□ -1.41
XRN1-212ENST00000486211 DMBT1Q9UGM3 2413 aaPredicted RBP6.24□□□□□ -1.41
XRN1-212ENST00000486211 A0A0J9YWU9 116 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 A0A1W2PRQ8 180 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 FAM183AA6NL82 134 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 G3V318 75 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 IDH3BO43837 385 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 MPZL2O60487 215 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 CNIH1O95406 144 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 OR5H8P0DN80 308 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 PEX2P28328 305 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 OR3A1P47881 315 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 RAB7AP51149 207 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 DGCR6Q14129 220 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 IL34Q6ZMJ4 242 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 IZUMO1Q8IYV9 350 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 OR9G1Q8NH87 305 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 FAM81AQ8TBF8 368 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 TSPEARQ8WU66 669 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 S1PR3Q99500 378 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 PAIP2Q9BPZ3 127 aaKnown RBP6.23□□□□□ -1.41
XRN1-212ENST00000486211 EBF4Q9BQW3 602 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 CHCHD6Q9BRQ6 235 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 FUZQ9BT04 418 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 ELOVL1Q9BW60 279 aa6.23□□□□□ -1.41
XRN1-212ENST00000486211 IFT27Q9BW83 186 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms