RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 SF3B6Q9Y3B4 125 aaKnown RBP11.16□□□□□ -0.62
SOX2-OT-209ENST00000485035 SOX21Q9Y651 276 aaPredicted RBP11.16□□□□□ -0.62
SOX2-OT-209ENST00000485035 CENPVL3A0A0U1RRI6 287 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 SH2D1BO14796 132 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 UCHL1P09936 223 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 OR3A1P47881 315 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 ZNF273Q14593 569 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 GRK1Q15835 563 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 SSX1Q16384 188 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 PIGYQ3MUY2 71 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 RUSC1-AS1Q66K80 236 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 TMEM200BQ69YZ2 307 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 Q6P435 159 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 BRD3OSQ6XYD6 125 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 C9orf139Q6ZV77 190 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 LRRTM1Q86UE6 522 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 CMTM4Q8IZR5 234 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 BPIFB2Q8N4F0 458 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 JAGN1Q8N5M9 183 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 OR4S1Q8NGB4 309 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 LHX4Q969G2 390 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 MUL1Q969V5 352 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 METTL9Q9H1A3 318 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 SIRT7Q9NRC8 400 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 IL36GQ9NZH8 169 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 GLS2Q9UI32 602 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 ING4Q9UNL4 249 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 MXRA5Q9NR99 2828 aa11.15□□□□□ -0.62
SOX2-OT-209ENST00000485035 A0A1W2PP11 408 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 MEX3AA1L020 520 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 M0R1W7 72 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 TCF21O43680 179 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 HTR3BO95264 441 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF44P15621 663 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 LMO1P25800 156 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 GABRA5P31644 462 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 BMXP51813 675 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 EDDM3BP56851 147 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 FABP5Q01469 135 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 SCN1BQ07699 218 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 EDDM3AQ14507 147 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 HSD17B12Q53GQ0 312 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 GPR157Q5UAW9 335 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 UBE2UQ5VVX9 321 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 GDPD3Q7L5L3 318 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 CDH26Q8IXH8 852 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 PDZD9Q8IXQ8 264 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 SVOPQ8N4V2 548 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 TPRX1Q8N7U7 411 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 NKAIN3Q8N8D7 197 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 OR4D6Q8NGJ1 314 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 OR51T1Q8NGJ9 327 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 TNFRSF14Q92956 283 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF48Q96MX3 618 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 NR1H4Q96RI1 486 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 TCF7L1Q9HCS4 588 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF581Q9P0T4 197 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 MRPS28Q9Y2Q9 187 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 LRRC42Q9Y546 428 aa11.14□□□□□ -0.63
SOX2-OT-209ENST00000485035 IGHV1-69DA0A0B4J2H0 117 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 A0A0G2JK05 382 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 RNASEK-C17orf49H0YIS7 233 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 SLC33A1O00400 549 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 DEGS1O15121 323 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 VENTXO95231 258 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 IGHV1-69P01742 117 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 CCL3L1P16619 93 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 SRMP19623 302 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 SERPINA2P20848 420 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 FPR2P25090 351 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 PSMA1P25786 263 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 DLX6P56179 175 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 KLRD1Q13241 179 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 IL13RA2Q14627 380 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 TRAM1Q15629 374 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 KCTD21Q4G0X4 260 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 SLC22A6Q4U2R8 563 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF773Q6PK81 442 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 METAP1DQ6UB28 335 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 GLIPR1L1Q6UWM5 242 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 C1orf122Q6ZSJ8 110 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 USP43Q70EL4 1123 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 OSR2Q8N2R0 312 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 C11orf42Q8N5U0 333 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 SIGLECL1Q8N7X8 197 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 CHST4Q8NCG5 386 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 OR5D13Q8NGL4 314 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 ZNF418Q8TF45 676 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 PHYHIPQ92561 330 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 C1orf147Q96MC9 270 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 S100A13Q99584 98 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 MDFIQ99750 246 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 PPA2Q9H2U2 334 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 METTL8Q9H825 291 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 UNKLQ9H9P5 680 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 ESM1Q9NQ30 184 aa11.13□□□□□ -0.63
SOX2-OT-209ENST00000485035 NDUFB11Q9NX14 153 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms