RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 NOSIPQ9Y314 301 aaKnown RBP2.16□□□□□ -2.06
SMC4-215ENST00000484799 NUP153P49790 1475 aaKnown RBP2.15□□□□□ -2.06
SMC4-215ENST00000484799 DHX57Q6P158 1386 aaKnown RBP2.15□□□□□ -2.07
SMC4-215ENST00000484799 IGLV3-12A0A075B6K2 115 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 GMNCA6NCL1 334 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 RBFOX3A6NFN3 312 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 BTNL10A8MVZ5 291 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 COX7A2P2O60397 106 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 BRI3O95415 125 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 PRTN3P24158 256 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 TEAD1P28347 426 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 AQP5P55064 265 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 RHOAP61586 193 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 HBG1P69891 147 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 HBG2P69892 147 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 SSX1Q16384 188 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 KLHL12Q53G59 568 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 MRPL2Q5T653 305 aaKnown RBP2.15□□□□□ -2.07
SMC4-215ENST00000484799 PLEKHG7Q6ZR37 379 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 PDPNQ86YL7 162 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 FAM9CQ8IZT9 166 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 LINC00337Q8N6G1 96 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 MNS1Q8NEH6 495 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 ATP6V1C2Q8NEY4 427 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 OR2AE1Q8NHA4 323 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 FAM57AQ8TBR7 257 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 MRAP2Q96G30 205 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 IP6K3Q96PC2 410 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 MARVELD1Q9BSK0 173 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 ZNF717Q9BY31 904 aaPredicted RBP2.15□□□□□ -2.07
SMC4-215ENST00000484799 ASB7Q9H672 318 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 RDH14Q9HBH5 336 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 ASCL3Q9NQ33 180 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 FBXO6Q9NRD1 293 aaPredicted RBP2.15□□□□□ -2.07
SMC4-215ENST00000484799 HMGXB4Q9UGU5 601 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 TAC3Q9UHF0 121 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 C15orf41Q9Y2V0 281 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 KLF13Q9Y2Y9 288 aaPredicted RBP2.15□□□□□ -2.07
SMC4-215ENST00000484799 PUS1Q9Y606 427 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMC4-215ENST00000484799 ZNF780BQ9Y6R6 833 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 S4R3C0 116 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 SVILO95425 2214 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 COL27A1Q8IZC6 1860 aaPredicted RBP2.15□□□□□ -2.07
SMC4-215ENST00000484799 NOS1P29475 1434 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 ELP1O95163 1332 aa2.15□□□□□ -2.07
SMC4-215ENST00000484799 A0A1B0GXF2 115 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 GOLGA6L4A6NEF3 574 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 PRAMEF26H0Y7S4 382 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 GOLGA8RI6L899 631 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 PHYHO14832 338 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 LIN7AO14910 233 aaPredicted RBP2.14□□□□□ -2.07
SMC4-215ENST00000484799 TOX3O15405 576 aaPredicted RBP2.14□□□□□ -2.07
SMC4-215ENST00000484799 GYG2O15488 501 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 SYNGR1O43759 233 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 NDUFS6O75380 124 aaKnown RBP2.14□□□□□ -2.07
SMC4-215ENST00000484799 DHRS3O75911 302 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 RAB36O95755 333 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 LHBP01229 141 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 IGKV1-39P01597 117 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 IGKV1D-39P04432 117 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 SCGB1C2P0DMR2 95 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ZNF35P13682 527 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ATF1P18846 271 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 IMPA1P29218 277 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 TSPOP30536 169 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 LGALS7P47929 136 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 CMC4P56277 68 aaPredicted RBP2.14□□□□□ -2.07
SMC4-215ENST00000484799 C1QTNF8P60827 252 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 SKP1P63208 163 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 MEF2CQ06413 473 aaPredicted RBP2.14□□□□□ -2.07
SMC4-215ENST00000484799 ZNF616Q08AN1 781 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 FUT5Q11128 374 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 COTL1Q14019 142 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ELOCQ15369 112 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ACTBL2Q562R1 376 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 TTMPQ5BVD1 217 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 OR10J3Q5JRS4 329 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 FAM162BQ5T6X4 162 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 USP50Q70EL3 339 aaPredicted RBP2.14□□□□□ -2.07
SMC4-215ENST00000484799 NEGR1Q7Z3B1 354 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ITPRIPQ8IWB1 547 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 CD302Q8IX05 232 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 TMEM105Q8N8V8 129 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ZDHHC22Q8N966 263 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ST20-AS1Q8NBB2 130 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ZNF555Q8NEP9 628 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 OR6K3Q8NGY3 331 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 ACTL9Q8TC94 416 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 DYNC2LI1Q8TCX1 351 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 SCGB1C1Q8TD33 95 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 DTD1Q8TEA8 209 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 YIPF5Q969M3 257 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 DDIT4LQ96D03 193 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 RMI2Q96E14 147 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 THTPAQ9BU02 230 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 UGT2B28Q9BY64 529 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 CA10Q9NS85 328 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 PSMD13Q9UNM6 376 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 TUBGCP6Q96RT7 1819 aa2.14□□□□□ -2.07
SMC4-215ENST00000484799 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms