RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 NDNFQ8TB73 568 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 FGGYQ96C11 551 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 COMMD4Q9H0A8 199 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 MMP28Q9H239 520 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 GAL3ST2Q9H3Q3 398 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 LIN7BQ9HAP6 207 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 FRRS1LQ9P0K9 344 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 HILPDAQ9Y5L2 63 aa9.2□□□□□ -0.94
SCFD1-206ENST00000484733 ALX3O95076 343 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 RPSAP08865 295 aaKnown RBP9.19□□□□□ -0.94
SCFD1-206ENST00000484733 ZNF20P17024 532 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 VDAC2P45880 294 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-206ENST00000484733 POU3F4P49335 361 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 BLCAPP62952 87 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 SLC34A1Q06495 639 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 HEPN1Q6WQI6 88 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 TPRX1Q8N7U7 411 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 HRASLS5Q96KN8 279 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 OPALINQ96PE5 141 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 CITED2Q99967 270 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-206ENST00000484733 CHST6Q9GZX3 395 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 EXOSC4Q9NPD3 245 aaKnown RBP9.19□□□□□ -0.94
SCFD1-206ENST00000484733 DPM3Q9P2X0 92 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 EXOGQ9Y2C4 368 aaKnown RBP9.19□□□□□ -0.94
SCFD1-206ENST00000484733 MEX3AA1L020 520 aaKnown RBP9.19□□□□□ -0.94
SCFD1-206ENST00000484733 SLC16A6O15403 523 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 MMP23AO75900 390 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 INMTO95050 263 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 CD83Q01151 205 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 Q6ZS46 218 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 LYG1Q8N1E2 194 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 WFDC9Q8NEX5 89 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 ZNF596Q8TC21 504 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 NEK6Q9HC98 313 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-206ENST00000484733 HHLA2Q9UM44 414 aa9.19□□□□□ -0.94
SCFD1-206ENST00000484733 TRGV10A0A0A0MS01 117 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 IGKV1-12A0A0C4DH73 117 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 DAPL1A0PJW8 107 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 OR2H2O95918 312 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 IGKV1D-12P01611 117 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 IGLV1-47P01700 117 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 CSN2P05814 226 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 HTR1AP08908 422 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 DUSP1P28562 367 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 BRS3P32247 399 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 NANOS3P60323 173 aaKnown RBP9.18□□□□□ -0.94
SCFD1-206ENST00000484733 Q6ZPA2 131 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 CHST4Q8NCG5 386 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 CREB3L1Q96BA8 519 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 R3HDM4Q96D70 268 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 RNFT2Q96EX2 444 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 MRPL48Q96GC5 212 aaKnown RBP9.18□□□□□ -0.94
SCFD1-206ENST00000484733 MYCBPQ99417 103 aaPredicted RBP9.18□□□□□ -0.94
SCFD1-206ENST00000484733 NECAP2Q9NVZ3 263 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 PCDHGB5Q9Y5G0 923 aa9.18□□□□□ -0.94
SCFD1-206ENST00000484733 A0A087X0M5 115 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 A0A1B0GX30 115 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 PEX14O75381 377 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 JUNBP17275 347 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-206ENST00000484733 ARHGDIBP52566 201 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 Q6P435 159 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 TRAPPC6BQ86SZ2 158 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 AKR1E2Q96JD6 320 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 NCOR1P1Q9H4R4 102 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 IMPAD1Q9NX62 359 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 GSTK1Q9Y2Q3 226 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 SAC3D1A6NKF1 404 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 SNTNA6NMZ2 147 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 OR4C45A6NMZ5 311 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 LEUTXA8MZ59 168 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 OOSP1A8MZH6 123 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 SIRPB1O00241 398 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 ALPLP05186 524 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 ALKBH1Q13686 389 aaKnown RBP9.17□□□□□ -0.94
SCFD1-206ENST00000484733 ARSJQ5FYB0 599 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-206ENST00000484733 PRAMEF5Q5TYX0 476 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 ACBD7Q8N6N7 88 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 ZCCHC4Q9H5U6 513 aa9.17□□□□□ -0.94
SCFD1-206ENST00000484733 LY6LH3BQJ8 138 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 CIB2O75838 187 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 OR2F2O95006 317 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 DBTP11182 482 aaKnown RBP9.16□□□□□ -0.94
SCFD1-206ENST00000484733 MRPL28Q13084 256 aaKnown RBP9.16□□□□□ -0.94
SCFD1-206ENST00000484733 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 OR5AU1Q8NGC0 362 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 OR13C3Q8NGS6 347 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 PELI1Q96FA3 418 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 RBM14Q96PK6 669 aaKnown RBP9.16□□□□□ -0.94
SCFD1-206ENST00000484733 ZNF281Q9Y2X9 895 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 ORC6Q9Y5N6 252 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 ODAMA1E959 279 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 ZNF729A6NN14 1252 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-206ENST00000484733 CGB3P0DN86 165 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 CGB7P0DN87 165 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 CALCBP10092 127 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 CDK2P24941 298 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 CEACAM3P40198 252 aa9.16□□□□□ -0.94
SCFD1-206ENST00000484733 GLIPR1P48060 266 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms