RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 LSM6P62312 80 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 DLX2Q07687 328 aaPredicted RBP17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 HYAL1Q12794 435 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 Q6ZSR3 168 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 NAXEQ8NCW5 288 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 OR10G3Q8NGC4 313 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 OR10AD1Q8NGE0 317 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 OR2AE1Q8NHA4 323 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 PRO1933Q9H354 126 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 SLC7A11Q9UPY5 501 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 PITX3O75364 302 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 TRGC1P0CF51 173 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 AADACP22760 399 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 OR2T2Q6IF00 324 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 GJC3Q8NFK1 279 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 MOB3AQ96BX8 217 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 TCFL5Q9UL49 500 aa17.12■□□□□ 0.33
RPUSD3-216ENST00000484134 SHISA7A6NL88 538 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 CST7O76096 145 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 TMEM50AO95807 157 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 MSR1P21757 451 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 ZNF266Q14584 549 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 CXorf66Q5JRM2 361 aaPredicted RBP17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 ZNF506Q5JVG8 444 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 Q6ZS52 159 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 TMEM252Q8N6L7 170 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 OR8G5Q8NG78 346 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 OR5C1Q8NGR4 320 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 FABP4P15090 132 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 OTX1P32242 354 aaPredicted RBP17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 C5orf24Q7Z6I8 188 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 CLDND2Q8NHS1 167 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 NABP1Q96AH0 204 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 SYT3Q9BQG1 590 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 NIPSNAP3BQ9BS92 247 aa17.11■□□□□ 0.33
RPUSD3-216ENST00000484134 IGKV1-12A0A0C4DH73 117 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 TRBV11-1A0A0K0K1C0 115 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 OR5H1A6NKK0 313 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 M0R135 149 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 SLC33A1O00400 549 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 SSSCA1O60232 199 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 IGKV1D-12P01611 117 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 IGLV3-19P01714 112 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 HSPB1P04792 205 aaKnown RBP17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 PNLIPP16233 465 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 NKX6-1P78426 367 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 P4HA3Q7Z4N8 544 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 ANKRD37Q7Z713 158 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 SNIP1Q8TAD8 396 aaKnown RBP17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 ZNF799Q96GE5 643 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 CALHM2Q9HA72 323 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 SIRT7Q9NRC8 400 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 WDFY3Q8IZQ1 3526 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 BRWD1Q9NSI6 2320 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 CCDC163A0A0D9SF12 145 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 BTBD17A6NE02 478 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 AQP7P3A6NL99 342 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 FOSL1P15407 271 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 NKX2-1P43699 371 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 DYNLT3P51808 116 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 C4orf17Q53FE4 359 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 SSX9Q7RTT3 188 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 REC114Q7Z4M0 266 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 TMEM217Q8N7C4 229 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 GPHA2Q96T91 129 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 NKX2-4Q9H2Z4 354 aa17.1■□□□□ 0.33
RPUSD3-216ENST00000484134 C3orf85A0A1B0GTC6 90 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 TRDCB7Z8K6 153 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 DDTP30046 118 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 FAM69BQ5VUD6 431 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 PLEKHF2Q9H8W4 249 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 EML6Q6ZMW3 1958 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 CCDC85CA6NKD9 419 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 TERTO14746 1132 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 MPPED1O15442 326 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 MYF5P13349 255 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 UCP3P55916 312 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 SLC35E3Q7Z769 313 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 METTL7AQ9H8H3 244 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 LYRM2Q9NU23 88 aaPredicted RBP17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 CLEC1BQ9P126 229 aa17.09■□□□□ 0.33
RPUSD3-216ENST00000484134 IGHV1OR21-1A0A087WYE8 117 aa17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 ZNF732B4DXR9 585 aa17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 PTBP3O95758 552 aaKnown RBP17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 MSX1P28360 303 aa17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 OR2M3Q8NG83 312 aa17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 ZNF837Q96EG3 531 aaPredicted RBP17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 ZNF385AQ96PM9 386 aaKnown RBP17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 CDCA3Q99618 268 aaPredicted RBP17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 SMOC1Q9H4F8 434 aa17.08■□□□□ 0.33
RPUSD3-216ENST00000484134 CABIN1Q9Y6J0 2220 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 ELOA3CA0A087WX78 387 aaPredicted RBP17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 PHOX2AO14813 284 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 CDS2O95674 445 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 NDUFB7P17568 137 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 RPL23AP62750 156 aaKnown RBP17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 HIST1H3AP68431 136 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 HIST2H3PS2Q5TEC6 136 aa17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 ZNF501Q96CX3 271 aaPredicted RBP17.08■□□□□ 0.32
RPUSD3-216ENST00000484134 FAM210BQ96KR6 192 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms