RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 COL10A1Q03692 680 aa13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 SMAD4Q13485 552 aaKnown RBP13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 MEX3BQ6ZN04 569 aaKnown RBP13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 TMEM123Q8N131 208 aa13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 CABLES2Q9BTV7 478 aa13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 ANGPTL4Q9BY76 406 aa13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 LYRM2Q9NU23 88 aaPredicted RBP13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 KNL1Q8NG31 2342 aa13.5□□□□□ -0.25
CNKSR1-207ENST00000482227 DYNLT3P51808 116 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 ZNF133P52736 654 aaPredicted RBP13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 EIF3IQ13347 325 aaKnown RBP13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 NKAIN1Q4KMZ8 207 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 CMTM1Q8IZ96 169 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 TMEM234Q8WY98 164 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 MMACHCQ9Y4U1 282 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 SHISA7A6NL88 538 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 ZNF705GA8MUZ8 300 aaPredicted RBP13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 EFNA2O43921 213 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 CD55P08174 381 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 CTSEP14091 401 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 HOXB2P14652 356 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 AKT2P31751 481 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 CLRN1P58418 232 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 YPEL5P62699 121 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 PNRC1Q12796 327 aaPredicted RBP13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 C16orf47Q6ZP98 133 aaPredicted RBP13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 ZNF441Q8N8Z8 693 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 NOXO1Q8NFA2 376 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 VDAC3Q9Y277 283 aa13.49□□□□□ -0.25
CNKSR1-207ENST00000482227 SSSCA1O60232 199 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 CDS2O95674 445 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 CEACAM1P13688 526 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 NKX2-1P43699 371 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 TLE4Q04727 773 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 RSPO4Q2I0M5 234 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 CXorf66Q5JRM2 361 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 COA6Q5JTJ3 125 aaKnown RBP13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 CARD17Q5XLA6 110 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 TMEM217Q8N7C4 229 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 OR10A7Q8NGE5 316 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 GNPNAT1Q96EK6 184 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 NKX2-4Q9H2Z4 354 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 GNG13Q9P2W3 67 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 REV3LO60673 3130 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 C2orf16Q68DN1 1984 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 A0A1W2PNV4 684 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 OPN1MWP04001 364 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 JMJD7P0C870 316 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 OPN1MW2P0DN77 364 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 OPN1MW3P0DN78 364 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 BRICD5Q6PL45 260 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 SLC25A47Q6Q0C1 308 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 C20orf196Q8IYI0 205 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 ST8SIA1Q92185 356 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 PGAM5Q96HS1 289 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 SDF2L1Q9HCN8 221 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 ALKBH4Q9NXW9 302 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 V9GYS6 101 aa13.48□□□□□ -0.25
CNKSR1-207ENST00000482227 ETV2O00321 342 aaPredicted RBP13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 ANGPTL7O43827 346 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 HBE1P02100 147 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 DTYMKP23919 212 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 RAB35Q15286 201 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 MOB3AQ96BX8 217 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 METTL9Q9H1A3 318 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 SRD5A3Q9H8P0 318 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 SPEGQ15772 3267 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 TRAV1-1A0A0B4J248 108 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 ANKUB1A6NFN9 424 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 B4DGG1 531 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 TRDCB7Z8K6 153 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 GCGP01275 180 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 TNFRSF4P43489 277 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 MPV17LQ2QL34 196 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 ZNF100Q8IYN0 542 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 BADQ92934 168 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 HIST1H2AAQ96QV6 131 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 RPP25Q9BUL9 199 aaKnown RBP13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
CNKSR1-207ENST00000482227 DHRS3O75911 302 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 IGHG1P01857 330 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 OR4A8P0C604 315 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 MMP9P14780 707 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 FOSL2P15408 326 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 P2RY6Q15077 328 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 FBXO46Q6PJ61 603 aaPredicted RBP13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 Q6ZPA2 131 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 MAML2Q8IZL2 1156 aaPredicted RBP13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 OR1N1Q8NGS0 311 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 DDIT4LQ96D03 193 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 ADGRG7Q96K78 797 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 CISD1Q9NZ45 108 aaKnown RBP13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 PIGLQ9Y2B2 252 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 TRANK1O15050 2925 aa13.46□□□□□ -0.25
CNKSR1-207ENST00000482227 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms