RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 DYSFO75923 2080 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 PPIAL4EA0A075B759 164 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 TRBV6-6A0A0A6YYG2 114 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 FUOMA2VDF0 154 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 OOEPA6NGQ2 149 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 OR2AT4A6NND4 320 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 PPIAL4DF5H284 164 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 F8VVB4 439 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 F8VWA3 439 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 RBBP9O75884 186 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 OR2H2O95918 312 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 HAND1O96004 215 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 CSF1P09603 554 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 CSF3P09919 207 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 PPIAL4FP0DN26 164 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 ZNF44P15621 663 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 TBPP20226 339 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 INPP1P49441 399 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 DEFA1P59665 94 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 DEFA3P59666 94 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 GNG2P59768 71 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 IKZF1Q13422 519 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 DYRK1AQ13627 763 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 C11orf91Q3C1V1 193 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 MOGAT2Q3SYC2 334 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 PLAC9Q5JTB6 97 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 TRIQKQ629K1 86 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 SIGIRRQ6IA17 410 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 Q6P435 159 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 C16orf87Q6PH81 154 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 BIVMQ86UB2 503 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 C19orf18Q8NEA5 215 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 OR5D13Q8NGL4 314 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 GPX8Q8TED1 209 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 SDSLQ96GA7 329 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 TIMD4Q96H15 378 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 MED30Q96HR3 178 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 ARHGAP5-AS1Q96IT6 56 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 CCL19Q99731 98 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 OCSTAMPQ9BR26 566 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 C7orf50Q9BRJ6 194 aaKnown RBP8.54□□□□□ -1.04
USP39-215ENST00000481409 THAP7Q9BT49 309 aaPredicted RBP8.54□□□□□ -1.04
USP39-215ENST00000481409 CHODLQ9H9P2 273 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 KAAG1Q9UBP8 84 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 MTFP1Q9UDX5 166 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 PPIAL4AQ9Y536 164 aa8.54□□□□□ -1.04
USP39-215ENST00000481409 A1L4Q6 167 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 NKX6-3A6NJ46 265 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 RFPL4AA6NLU0 287 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 RFPL4AL1F8VTS6 287 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.53□□□□□ -1.04
USP39-215ENST00000481409 HPXP02790 462 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 CD3GP09693 182 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 PSG2P11465 335 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 IL7P13232 177 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 DAOP14920 347 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 GNB3P16520 340 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 PRDX2P32119 198 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 RCVRNP35243 200 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 FAUP35544 74 aaKnown RBP8.53□□□□□ -1.04
USP39-215ENST00000481409 ARFRP1Q13795 201 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ACTBL2Q562R1 376 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ATAD3CQ5T2N8 411 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 STUMQ69YW2 141 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 Q6ZS49 121 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 MOB1BQ7L9L4 216 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 SLC36A1Q7Z2H8 476 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ZNF554Q86TJ5 538 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 SNX29P2Q8IUI4 249 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ZNF295-AS1Q8N0V1 137 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 SUMF2Q8NBJ7 301 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ANGPTL6Q8NI99 470 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 CCL17Q92583 94 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 RAB1CQ92928 201 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 SEH1LQ96EE3 360 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 SNX22Q96L94 193 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ZNF488Q96MN9 340 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 SDHCQ99643 169 aaPredicted RBP8.53□□□□□ -1.04
USP39-215ENST00000481409 DPCDQ9BVM2 203 aaPredicted RBP8.53□□□□□ -1.04
USP39-215ENST00000481409 ZNF665Q9H7R5 613 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 C12orf4Q9NQ89 552 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ZNF701Q9NV72 531 aaPredicted RBP8.53□□□□□ -1.04
USP39-215ENST00000481409 ANAPC10Q9UM13 185 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ABCA4P78363 2273 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 USP9XQ93008 2570 aaPredicted RBP8.53□□□□□ -1.04
USP39-215ENST00000481409 DSCAMO60469 2012 aa8.53□□□□□ -1.04
USP39-215ENST00000481409 ICE1Q9Y2F5 2266 aa8.52□□□□□ -1.04
USP39-215ENST00000481409 TRAV24A0A0B4J272 114 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 TMEM235A6NFC5 223 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 NAP1L6A6NFF2 107 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 CENPXA8MT69 81 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 SLC33A1O00400 549 aaPredicted RBP8.52□□□□□ -1.05
USP39-215ENST00000481409 RP2O75695 350 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 DIRAS3O95661 229 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 NAT1P18440 290 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 ERP29P30040 261 aaKnown RBP8.52□□□□□ -1.05
USP39-215ENST00000481409 DSCR9P59020 149 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 BTG1P62324 171 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 TMEM155Q4W5P6 130 aa8.52□□□□□ -1.05
USP39-215ENST00000481409 PAN3Q58A45 887 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms