RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 OR13C3Q8NGS6 347 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 ZNF596Q8TC21 504 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 CORO2AQ92828 525 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 CREB3L1Q96BA8 519 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 FGGYQ96C11 551 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 PELI1Q96FA3 418 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 AKR1E2Q96JD6 320 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 C4orf36Q96KX1 117 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 Q96MT0 163 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 CLEC7AQ9BXN2 247 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 PRSS22Q9GZN4 317 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 ZNF702PQ9H963 129 aa9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.79□□□□□ -0.84
SQSTM1-207ENST00000481335 OR4C45A6NMZ5 311 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 H3BNX3 289 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 F2RL2O00254 374 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 FADS2O95864 444 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 OR2H2O95918 312 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 CCDC159P0C7I6 412 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 DBTP11182 482 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 GABRB1P18505 474 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 HTR1DP28221 377 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 CD34P28906 385 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 OR3A1P47881 315 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 RAB40BQ12829 278 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 DYNC1I2Q13409 638 aaKnown RBP9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 HEPN1Q6WQI6 88 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 TRAPPC6BQ86SZ2 158 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 SERPINA12Q8IW75 414 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 DYNAPQ8N1N2 210 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 OR4S1Q8NGB4 309 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 OR5D14Q8NGL3 314 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 FAM110DQ8TAY7 271 aaPredicted RBP9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 WIPF2Q8TF74 440 aaPredicted RBP9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 C9orf16Q9BUW7 83 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 ALG8Q9BVK2 526 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 CHST6Q9GZX3 395 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 ZCCHC4Q9H5U6 513 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 SERTAD4Q9NUC0 356 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 SIGLEC9Q9Y336 463 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 GMPPBQ9Y5P6 360 aa9.78□□□□□ -0.84
SQSTM1-207ENST00000481335 NOTCH3Q9UM47 2321 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 FAM90A22PA8MWA6 464 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 J3QLW9 94 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 SULT1B1O43704 296 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 FBXO24O75426 580 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 ZNF19P17023 458 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 BDH1Q02338 343 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 EMX1Q04741 257 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 LDLRAD2Q5SZI1 272 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 KPRPQ5T749 579 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 CCBE1Q6UXH8 406 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 NDUFA11Q86Y39 141 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 PARP16Q8N5Y8 322 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 OR51A4Q8NGJ6 313 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 OR4P4Q8NGL7 312 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 OR13C9Q8NGT0 318 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 NDNFQ8TB73 568 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 LGALS12Q96DT0 336 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 NKX3-1Q99801 234 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 WNT10AQ9GZT5 417 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 NCOR1P1Q9H4R4 102 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 MRPS18AQ9NVS2 196 aaKnown RBP9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 DPM3Q9P2X0 92 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 IL36RNQ9UBH0 155 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 FOXJ3Q9UPW0 622 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 GSTK1Q9Y2Q3 226 aa9.77□□□□□ -0.85
SQSTM1-207ENST00000481335 A0A087X0M5 115 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 IGKV1-12A0A0C4DH73 117 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 A0A1B0GX30 115 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 OOSP1A8MZH6 123 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 XPNPEP2O43895 674 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 PEX14O75381 377 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 INMTO95050 263 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 IGKV1D-12P01611 117 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 VSIG10L2P0DP72 767 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 ZNF44P15621 663 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 PAX6P26367 422 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 BRS3P32247 399 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 CEACAM3P40198 252 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 PTGFRP43088 359 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 MTNR1BP49286 362 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 PAX5Q02548 391 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 SLC34A1Q06495 639 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 KPNB1Q14974 876 aaKnown RBP9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 ELP2Q6IA86 826 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 CCDC121Q6ZUS5 278 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 REC114Q7Z4M0 266 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 CBR4Q8N4T8 237 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 TPRX1Q8N7U7 411 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 PXT1Q8NFP0 134 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 OR4F17Q8NGA8 305 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 RHOXF1Q8NHV9 184 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 RDH12Q96NR8 316 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 OR4F4Q96R69 305 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 JAM3Q9BX67 310 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 LIN7BQ9HAP6 207 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 OR6C3Q9NZP0 311 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 MYRFQ9Y2G1 1151 aa9.76□□□□□ -0.85
SQSTM1-207ENST00000481335 RPL36Q9Y3U8 105 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms