RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 MADCAM1Q13477 382 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 FLOT2Q14254 428 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 SLC48A1Q6P1K1 146 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 TMEM107Q6UX40 140 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 ANGPTL8Q6UXH0 198 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 ZFP2Q6ZN57 461 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 LINC00173Q6ZV60 143 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 DHFR2Q86XF0 187 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CALHM3Q86XJ0 350 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 MICU2Q8IYU8 434 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 LRRC25Q8N386 305 aaPredicted RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 OR8J3Q8NGG0 315 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 OR51Q1Q8NH59 317 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 OR10A6Q8NH74 314 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 KCNG3Q8TAE7 436 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 PLPPR1Q8TBJ4 325 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 ZNF596Q8TC21 504 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 TMEM54Q969K7 222 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CTRCQ99895 268 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 TPT1P8Q9HAU6 139 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 PATZ1Q9HBE1 687 aaKnown RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 SLC39A1Q9NY26 324 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 TAS2R9Q9NYW1 312 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 VAPAQ9P0L0 249 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 DHCR7Q9UBM7 475 aaKnown RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 ZNF282Q9UDV7 671 aaPredicted RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 CD300AQ9UGN4 299 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 POMPQ9Y244 141 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 F11RQ9Y624 299 aaKnown RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 C2orf16Q68DN1 1984 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 COL4A2P08572 1712 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 DENND4AQ7Z401 1863 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 MTCL1Q9Y4B5 1905 aaKnown RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 ZDBF2Q9HCK1 2354 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 DOCK4Q8N1I0 1966 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 EYSQ5T1H1 3165 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 C5orf42Q9H799 3197 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 TRAV39A0A0B4J263 110 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 PLAC8L1A1L4L8 177 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 C5orf58C9J3I9 102 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 CXCR6O00574 342 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 ANGPTL7O43827 346 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OBSL1O75147 1896 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 FKBP6O75344 327 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 ENTPD5O75356 428 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 WBP4O75554 376 aaKnown RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 CST1P01037 141 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 IFNA14P01570 189 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 IGLV2-23P01705 113 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 C1QCP02747 245 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 IFNA16P05015 189 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OR12D1P0DN82 309 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 GPX2P18283 190 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OMGP23515 440 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 ERFP50548 548 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 CDK9P50750 372 aaKnown RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 GZMMP51124 257 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 ZNF136P52737 540 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 CLDN6P56747 220 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OR4D2P58180 307 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 BTG2P78543 158 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 BIKQ13323 160 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 EBI3Q14213 229 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 CLINT1Q14677 625 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 C16orf72Q14CZ0 275 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 PTGES3Q15185 160 aaKnown RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 RGNQ15493 299 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 RSPO1Q2MKA7 263 aaPredicted RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 NKAIN1Q4KMZ8 207 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 MLIPQ5VWP3 458 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 SAXO2Q658L1 398 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 GLYATQ6IB77 296 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 TNFAIP8L2Q6P589 184 aaPredicted RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 ERICH5Q6P6B1 374 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 LYPD2Q6UXB3 125 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OAFQ86UD1 273 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 SPATA24Q86W54 205 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 PRSS58Q8IYP2 241 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 DEFB124Q8NES8 71 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 B3GNT7Q8NFL0 401 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OR7G2Q8NG99 324 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OR9A2Q8NGT5 310 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 OR5AK3PQ8NH89 298 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 SFXN5Q8TD22 340 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 GPR151Q8TDV0 419 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 DOK4Q8TEW6 326 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 ZFP90Q8TF47 636 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 GBF1Q92538 1859 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 MAL2Q969L2 176 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 PPWD1Q96BP3 646 aaKnown RBP2.38□□□□□ -2.03
CBX3-207ENST00000481300 NEURL3Q96EH8 262 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 PIK3IP1Q96FE7 263 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 ZNF681Q96N22 645 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 SCN2AQ99250 2005 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 P2RX4Q99571 388 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 ULBP3Q9BZM4 244 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 TRIM4Q9C037 500 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 CXorf21Q9HAI6 301 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 FBXO8Q9NRD0 319 aa2.38□□□□□ -2.03
CBX3-207ENST00000481300 PRTFDC1Q9NRG1 225 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms