RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RASL12Q9NYN1 266 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 EHFQ9NZC4 300 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 COQ3Q9NZJ6 369 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 GLS2Q9UI32 602 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 MGAT4AQ9UM21 535 aa9.35□□□□□ -0.91
VTI1A-204ENST00000480057 MGAQ8IWI9 3026 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 KIR2DS1A0A191URI9 304 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 PLSCR5A0PG75 271 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 OR2AT4A6NND4 320 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 CCL21O00585 134 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 CDIPTO14735 213 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 DEGS1O15121 323 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 CSN2P05814 226 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 THBDP07204 575 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 ADH4P08319 380 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 CTXN2P0C2S0 81 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 OR4E1P0C645 316 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 ERP29P30040 261 aaKnown RBP9.34□□□□□ -0.91
VTI1A-204ENST00000480057 KIR2DS4P43632 304 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 SORDQ00796 357 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 KIR2DS1Q14954 304 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 MPPED2Q15777 294 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 C4orf46Q504U0 113 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 Q6P435 159 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 NCCRP1Q6ZVX7 275 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-204ENST00000480057 MOB1BQ7L9L4 216 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 NOXA1Q86UR1 476 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 C11orf53Q8IXP5 236 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 SUMF2Q8NBJ7 301 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 PRR7Q8TB68 274 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 RNASE6Q93091 150 aaKnown RBP9.34□□□□□ -0.91
VTI1A-204ENST00000480057 MRPL24Q96A35 216 aaKnown RBP9.34□□□□□ -0.91
VTI1A-204ENST00000480057 RADILQ96JH8 1075 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 FYTTD1Q96QD9 318 aaKnown RBP9.34□□□□□ -0.91
VTI1A-204ENST00000480057 DIRC2Q96SL1 478 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 SEC22CQ9BRL7 303 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 HDHD3Q9BSH5 251 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-204ENST00000480057 Q9N2K0 584 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF581Q9P0T4 197 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF69Q9UC07 566 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 ZNF230Q9UIE0 474 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-204ENST00000480057 GPR132Q9UNW8 380 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 SPTBN4Q9H254 2564 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 ASPMQ8IZT6 3477 aa9.34□□□□□ -0.91
VTI1A-204ENST00000480057 TRAV24A0A0B4J272 114 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 MED19A0JLT2 244 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 DPRXA6NFQ7 191 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 F5H5P2 479 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 SH2D1BO14796 132 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 SNAPC5O75971 98 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 NXPH2O95156 264 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 KNG1P01042 644 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 GRPP07492 148 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 GIPP09681 153 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 LMO1P25800 156 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 GATA4P43694 442 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 KCNJ3P48549 501 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 SEC61A1P61619 476 aaKnown RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 DHODHQ02127 395 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 MSMPQ1L6U9 139 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 AADACL3Q5VUY0 350 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 ZNF660Q6AZW8 331 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 LPCAT3Q6P1A2 487 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 ZNF880Q6PDB4 577 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 C22orf34Q6ZV56 151 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 TMED4Q7Z7H5 227 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 LYG2Q86SG7 212 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 WFDC8Q8IUA0 241 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 GAPTQ8N292 157 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 LILRB4Q8NHJ6 448 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 ERGIC1Q969X5 290 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 ZNF488Q96MN9 340 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 DPCDQ9BVM2 203 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 BEX2Q9BXY8 128 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 RANBP3Q9H6Z4 567 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 BEX1Q9HBH7 125 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 CHMP1AQ9HD42 196 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-204ENST00000480057 ZDHHC8Q9ULC8 765 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 IGF2RP11717 2491 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 CACNA1AO00555 2505 aa9.33□□□□□ -0.92
VTI1A-204ENST00000480057 DMXL2Q8TDJ6 3036 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 SHANK1Q9Y566 2161 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 IGKV1D-8A0A087WSZ0 117 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 A0A0B4J2A0 478 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 ZSCAN5BA6NJL1 495 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 A8MV72 311 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-204ENST00000480057 DIRAS3O95661 229 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 OR5H8P0DN80 308 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 HLA-GP17693 338 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 ZBTB25P24278 435 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 GZMKP49863 264 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 UCP3P55916 312 aa9.32□□□□□ -0.92
VTI1A-204ENST00000480057 RAP2BP61225 183 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms