RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 DDI2Q5TDH0 399 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 PNKDQ8N490 385 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 PXT1Q8NFP0 134 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 OR4S1Q8NGB4 309 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 OR5D13Q8NGL4 314 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 TBC1D15Q8TC07 691 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 CPNE2Q96FN4 548 aaPredicted RBP12.76□□□□□ -0.37
HMGA1-206ENST00000478214 CNBD2Q96M20 576 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 MND1Q9BWT6 205 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
HMGA1-206ENST00000478214 TMEM138Q9NPI0 162 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
HMGA1-206ENST00000478214 LSM2Q9Y333 95 aaKnown RBP12.76□□□□□ -0.37
HMGA1-206ENST00000478214 A0A1W2PPH5 198 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 MAGEA13PA6NCF6 341 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 NPFFO15130 113 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 GPX5O75715 221 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 CD1AP06126 327 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 EEF1B2P24534 225 aaKnown RBP12.75□□□□□ -0.37
HMGA1-206ENST00000478214 VHLP40337 213 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 OR3A1P47881 315 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 OR3A4PP47883 348 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 BDH1Q02338 343 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 SCN1BQ07699 218 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 NCR3LG1Q68D85 454 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 HCP5Q6MZN7 132 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 Q6YL49 198 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 TPRX1Q8N7U7 411 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 OR10K1Q8NGX5 313 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 FAM192AQ9GZU8 254 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 RHOFQ9HBH0 211 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 NOX4Q9NPH5 578 aa12.75□□□□□ -0.37
HMGA1-206ENST00000478214 CLDN34H7C241 214 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 PIN1P1O15428 100 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 RGS10O43665 173 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 CDRT1O95170 752 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 RNASE1P07998 156 aaKnown RBP12.74□□□□□ -0.37
HMGA1-206ENST00000478214 MELTFP08582 738 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 ZNF44P15621 663 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 FSTP19883 344 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 CRHBPP24387 322 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 ZNF93P35789 620 aaPredicted RBP12.74□□□□□ -0.37
HMGA1-206ENST00000478214 TGFBR2P37173 567 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 PTGFRP43088 359 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 MTNR1BP49286 362 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 UBE2E1P51965 193 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 DLX6P56179 175 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 ACSM1Q08AH1 577 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 SPHARQ15513 63 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 MED22Q15528 200 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 ELP2Q6IA86 826 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 Q6P435 159 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 ASCL4Q6XD76 172 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 TCF23Q7RTU1 214 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 SLC25A28Q96A46 364 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 DERL3Q96Q80 235 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 NR1H4Q96RI1 486 aaPredicted RBP12.74□□□□□ -0.37
HMGA1-206ENST00000478214 ZNF184Q99676 751 aaPredicted RBP12.74□□□□□ -0.37
HMGA1-206ENST00000478214 ZMAT3Q9HA38 289 aaKnown RBP12.74□□□□□ -0.37
HMGA1-206ENST00000478214 TNFRSF19Q9NS68 423 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 CKLFQ9UBR5 152 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 RAB26Q9ULW5 256 aa12.74□□□□□ -0.37
HMGA1-206ENST00000478214 MGST3O14880 152 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 ZNF728P0DKX0 622 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 LMO1P25800 156 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 SAA4P35542 130 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
HMGA1-206ENST00000478214 INSL4Q14641 139 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 RSU1Q15404 277 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 ZNF782Q6ZMW2 699 aaPredicted RBP12.73□□□□□ -0.37
HMGA1-206ENST00000478214 Q8NFD4 153 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 PPP1R35Q8TAP8 253 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 GCDHQ92947 438 aaPredicted RBP12.73□□□□□ -0.37
HMGA1-206ENST00000478214 CCDC90BQ9GZT6 254 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 PPA2Q9H2U2 334 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 ING4Q9UNL4 249 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 SF3B6Q9Y3B4 125 aaKnown RBP12.73□□□□□ -0.37
HMGA1-206ENST00000478214 FAM96BQ9Y3D0 163 aa12.73□□□□□ -0.37
HMGA1-206ENST00000478214 A0A0G2JK05 382 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 hCG_1809904A0A1W2PP81 198 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 A0A1W2PPE2 198 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 A0A1W2PR64 198 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 A0A1W2PRV1 198 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 MEIOCA2RUB1 952 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 TMEM89A2RUT3 159 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 C17orf98A8MV24 154 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 SLC33A1O00400 549 aaPredicted RBP12.72□□□□□ -0.37
HMGA1-206ENST00000478214 DEGS1O15121 323 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 HTR3BO95264 441 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 COX7A1P24310 79 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 BMXP51813 675 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 P2RX3P56373 397 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 PIGYQ3MUY2 71 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 OR51T1Q8NGJ9 327 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 METTL9Q9H1A3 318 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms