RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 IFNA21P01568 189 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 C1QTNF9P0C862 333 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 ATXN7L3Q14CW9 347 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF766Q5HY98 468 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 FBXW9Q5XUX1 488 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 SLC22A25Q6T423 547 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 CCDC36Q8IYA8 594 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 IL22RA1Q8N6P7 574 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 PAPOLGQ9BWT3 736 aaKnown RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 PIGMQ9H3S5 423 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 LIPGQ9Y5X9 500 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 CNOT1A5YKK6 2376 aaKnown RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 A0A096LPE4 126 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 TRGV5A0A0B4J1U4 118 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 A0A1W2PPZ6 126 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 MPTX1A8MV57 137 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 IL18BPO95998 194 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 PLATP00750 562 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 KNG1P01042 644 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 IGHG3P01860 377 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 FOXG1P55316 489 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 RND3P61587 244 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 RAB32Q13637 225 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 IGFL2Q6UWQ7 119 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 CCDC71LQ8N9Z2 235 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 OR5L1Q8NGL2 311 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 OR5P3Q8WZ94 311 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 MARS2Q96GW9 593 aaKnown RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 GMPPAQ96IJ6 420 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 C18orf12Q96KH6 178 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 SYT3Q9BQG1 590 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 PKIBQ9C010 78 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 RIMS4Q9H426 269 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-212ENST00000477970 OR5AC2Q9NZP5 309 aa10.49□□□□□ -0.73
PTPRF-212ENST00000477970 BET1O15155 118 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 CD79AP11912 226 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 GLP1RP43220 463 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 PIGPP57054 158 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 IL13RA2Q14627 380 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 Q6ZPA2 131 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 RELL2Q8NC24 303 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-212ENST00000477970 SPACA1Q9HBV2 294 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 SPRR3Q9UBC9 169 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 H7C1Q1 480 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 DEDDO75618 318 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 APLNRP35414 380 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 TFAP2EQ6VUC0 442 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 ASCL3Q9NQ33 180 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 SLC22A20A6NK97 555 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 GAPDHP04406 335 aaKnown RBP10.48□□□□□ -0.73
PTPRF-212ENST00000477970 HOXD4P09016 255 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-212ENST00000477970 BCL3P20749 454 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 OPRM1P35372 400 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 IL24Q13007 206 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 BEX5Q5H9J7 111 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 ZCCHC14Q8WYQ9 949 aaKnown RBP10.48□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF552Q9H707 407 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-212ENST00000477970 Q9N2K0 584 aa10.48□□□□□ -0.73
PTPRF-212ENST00000477970 CD300LBA8K4G0 201 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 FCGR2CP31995 323 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 NPBWR2P48146 333 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 TNFSF10P50591 281 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 PRSS12P56730 875 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 SRPXP78539 464 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 GGNBP1Q5YKI7 109 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 LIAT1Q6ZQX7 453 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 LDLRAD3Q86YD5 345 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 RNF141Q8WVD5 230 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 EXTL1Q92935 676 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 PRR13Q9NZ81 148 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 ZSCAN5BA6NJL1 495 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 TEX46H3BTG2 121 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 CNOT4O95628 575 aaKnown RBP10.47□□□□□ -0.73
PTPRF-212ENST00000477970 CTXN2P0C2S0 81 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 HKR1P10072 659 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 CLN3Q13286 438 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 TGIF1Q15583 401 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 IAH1Q2TAA2 248 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-212ENST00000477970 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 ABCA11PQ4W5N1 156 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF573Q86YE8 665 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 RTN4IP1Q8WWV3 396 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-212ENST00000477970 ZNF442Q9H7R0 627 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 PLEKHA2Q9HB19 425 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 SLC2A9Q9NRM0 540 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 PRSS50Q9UI38 385 aa10.47□□□□□ -0.73
PTPRF-212ENST00000477970 HOXB5P09067 269 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-212ENST00000477970 WNT5AP41221 380 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 HAAOP46952 286 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 KCNJ3P48549 501 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 ARG2P78540 354 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 GUSBP1Q15486 140 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 FBXW12Q6X9E4 464 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 GALNT11Q8NCW6 608 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 MSI2Q96DH6 328 aaKnown RBP10.46□□□□□ -0.73
PTPRF-212ENST00000477970 CCDC120Q96HB5 630 aa10.46□□□□□ -0.73
PTPRF-212ENST00000477970 HIST1H2AAQ96QV6 131 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms