RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.63□□□□□ -1.19
COL4A5-204ENST00000477429 LAMP5Q9UJQ1 280 aa7.63□□□□□ -1.19
COL4A5-204ENST00000477429 ZNF256Q9Y2P7 627 aaPredicted RBP7.63□□□□□ -1.19
COL4A5-204ENST00000477429 MOB4Q9Y3A3 225 aa7.63□□□□□ -1.19
COL4A5-204ENST00000477429 HSPE1-MOB4S4R3N1 261 aa7.63□□□□□ -1.19
COL4A5-204ENST00000477429 IGKV1-12A0A0C4DH73 117 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 ACOD1A6NK06 481 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 SERPINE3A8MV23 424 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 LEUTXA8MZ59 168 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 B2RBV5 119 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 H3BN98 237 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 M0R129 80 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 SIRPB1O00241 398 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 NDUFAB1O14561 156 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 IGKV1D-12P01611 117 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 IGHG2P01859 326 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 FRMD6-AS1P0C7T7 363 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 H2AFXP16104 143 aaPredicted RBP7.62□□□□□ -1.19
COL4A5-204ENST00000477429 CD34P28906 385 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 BRS3P32247 399 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 ESRRGP62508 458 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 AESQ08117 197 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 APOFQ13790 326 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 RBM39Q14498 530 aaKnown RBP7.62□□□□□ -1.19
COL4A5-204ENST00000477429 ZNF260Q3ZCT1 412 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 C9orf66Q5T8R8 295 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 C16orf89Q6UX73 402 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 HEPN1Q6WQI6 88 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 SSX6Q7RTT6 188 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 TRAPPC6BQ86SZ2 158 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 ELMOD2Q8IZ81 293 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 STPG2Q8N412 459 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 Q8NFD4 153 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 OR10G2Q8NGC3 310 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 EMG1Q92979 244 aaKnown RBP7.62□□□□□ -1.19
COL4A5-204ENST00000477429 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 PAPOLBQ9NRJ5 636 aaKnown RBP7.62□□□□□ -1.19
COL4A5-204ENST00000477429 ZFP57Q9NU63 452 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 ING3Q9NXR8 418 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 DNAJB9Q9UBS3 223 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 MRM2Q9UI43 246 aaKnown RBP7.62□□□□□ -1.19
COL4A5-204ENST00000477429 SLC7A11Q9UPY5 501 aa7.62□□□□□ -1.19
COL4A5-204ENST00000477429 UBE2J1Q9Y385 318 aaPredicted RBP7.62□□□□□ -1.19
COL4A5-204ENST00000477429 IGKV1-9A0A0C4DH69 117 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 PRODHO43272 600 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 CCDC22O60826 627 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 GMNNO75496 209 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 HCKP08631 526 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 PEX2P28328 305 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 CDK5Q00535 292 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 FHL3Q13643 280 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 KIR2DS1Q14954 304 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 KLHL22Q53GT1 634 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 OR2T5Q6IEZ7 315 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 KCTD18Q6PI47 426 aaPredicted RBP7.61□□□□□ -1.19
COL4A5-204ENST00000477429 DEGS2Q6QHC5 323 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 MEPCEQ7L2J0 689 aaKnown RBP7.61□□□□□ -1.19
COL4A5-204ENST00000477429 PIGWQ7Z7B1 504 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 ZNF679Q8IYX0 411 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 OR2T29Q8NH02 315 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 TEX47Q8TBZ9 253 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 CHPT1Q8WUD6 406 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 CORO2AQ92828 525 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 YIPF3Q9GZM5 350 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 PPIL3Q9H2H8 161 aaKnown RBP7.61□□□□□ -1.19
COL4A5-204ENST00000477429 OR52A1Q9UKL2 312 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 GTF2A1LQ9UNN4 478 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 SAMHD1Q9Y3Z3 626 aaKnown RBP7.61□□□□□ -1.19
COL4A5-204ENST00000477429 SMAD5-AS1Q9Y6J3 95 aa7.61□□□□□ -1.19
COL4A5-204ENST00000477429 A0A087X0M5 115 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 IGHV3-72A0A0B4J1Y9 119 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 A0A1B0GX30 115 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 A0A1W2PPE3 182 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 TRIM64CA6NLI5 447 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 LOC110117498-PIK3R3F6TDL0 507 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 MGST3O14880 152 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 BPNT1O95861 308 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 OR2H2O95918 312 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 GHRHP01286 108 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 IGKV1D-33P01593 117 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 IGKV1-33P01594 117 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 CGB3P0DN86 165 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 CGB7P0DN87 165 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 PRKACAP17612 351 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 CCL1P22362 96 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 PRKACGP22612 351 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 ERP29P30040 261 aaKnown RBP7.6□□□□□ -1.19
COL4A5-204ENST00000477429 GPR12P47775 334 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 RPS7P62081 194 aaKnown RBP7.6□□□□□ -1.19
COL4A5-204ENST00000477429 MS4A2Q01362 244 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 CFHR3Q02985 330 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 KIAA0141Q14154 515 aaPredicted RBP7.6□□□□□ -1.19
COL4A5-204ENST00000477429 ZBTB49Q6ZSB9 765 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 SLC35E3Q7Z769 313 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 RTN4RL2Q86UN3 420 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 THNSL2Q86YJ6 484 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 OR5M8Q8NGP6 311 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 ZNF596Q8TC21 504 aa7.6□□□□□ -1.19
COL4A5-204ENST00000477429 HSPB9Q9BQS6 159 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms