RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 FDX2Q6P4F2 183 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 OR13G1Q8NGZ3 307 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 ZPBPQ9BS86 351 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 TRAF4Q9BUZ4 470 aaPredicted RBP9.62□□□□□ -0.87
COL27A1-204ENST00000477421 SLC2A9Q9NRM0 540 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 TP53TG5Q9Y2B4 290 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 CLPSP04118 112 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 CELA3AP09093 270 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 CHATP28329 748 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 ALDH3B1P43353 468 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 CLEC12BQ2HXU8 276 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 MIDNQ504T8 468 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 RPUSD3Q6P087 351 aaKnown RBP9.62□□□□□ -0.87
COL27A1-204ENST00000477421 RNF144BQ7Z419 303 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 BVESQ8NE79 360 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 ALX4Q9H161 411 aaPredicted RBP9.62□□□□□ -0.87
COL27A1-204ENST00000477421 B3GAT1Q9P2W7 334 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 STARD10Q9Y365 291 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 DHRS7CA6NNS2 312 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 ATG12O94817 140 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 BCL3P20749 454 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 ZBTB25P24278 435 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 SOX8P57073 446 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
COL27A1-204ENST00000477421 CATR1Q13166 79 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 PLAC9Q5JTB6 97 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 FAM122CQ6P4D5 195 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 OR2M7Q8NG81 312 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 CHRNA10Q9GZZ6 450 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 PIPOXQ9P0Z9 390 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 PRUNE2Q8WUY3 3088 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 UMAD1C9J7I0 102 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 K7ESF4 209 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 CDIPTO14735 213 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 HPP00738 406 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 IFNA1P01562 189 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 PTGER4P35408 488 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 BAXQ07812 192 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 MSMO1Q15800 293 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 IGSF11Q5DX21 431 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 FAM58AQ8N1B3 248 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 OR10V1Q8NGI7 309 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 AQP3Q92482 292 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 SF3B5Q9BWJ5 86 aaKnown RBP9.61□□□□□ -0.87
COL27A1-204ENST00000477421 NAA60Q9H7X0 242 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 FN3KRPQ9HA64 309 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 PLEKHA2Q9HB19 425 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 GCM1Q9NP62 436 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 TNFSF18Q9UNG2 199 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 POLDIP2Q9Y2S7 368 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 PLXNB3Q9ULL4 1909 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 ARPC4-TTLL3A0A0A6YYG9 625 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 SH2D1BO14796 132 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 TAAR5O14804 337 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 RTN4RL2Q86UN3 420 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 OR6S1Q8NH40 331 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 SNIP1Q8TAD8 396 aaKnown RBP9.61□□□□□ -0.87
COL27A1-204ENST00000477421 RXFP4Q8TDU9 374 aa9.61□□□□□ -0.87
COL27A1-204ENST00000477421 HEYLQ9NQ87 328 aaPredicted RBP9.61□□□□□ -0.87
COL27A1-204ENST00000477421 IGHV3-43A0A0B4J1X8 118 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 MPTX1A8MV57 137 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 SOX15O60248 233 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 IGHV3-43DP0DP04 118 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 TRIP6Q15654 476 aaKnown RBP9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR10C1Q96KK4 312 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 AMDHD2Q9Y303 409 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 PLXNA2O75051 1894 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 A0A1W2PPV4 95 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR6C65A6NJZ3 312 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 RNASEK-C17orf49H0YIS7 233 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 C1QL1O75973 258 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 NGFP01138 241 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 GLAP06280 429 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 F2RL1P55085 397 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR8B8Q15620 311 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 ANKRD55Q3KP44 614 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 PHYHD1Q5SRE7 291 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 SLC36A1Q7Z2H8 476 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR10S1Q8NGN2 331 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR5C1Q8NGR4 320 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 S100PBPQ96BU1 408 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 C5orf66Q9H5L9 145 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 CCL28Q9NRJ3 127 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 TINAGQ9UJW2 476 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 C3orf85A0A1B0GTC6 90 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 CDRT15L2A8MXV6 281 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR2A4O95047 310 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 CST2P09228 141 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 DAOP14920 347 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 TAGLN2P37802 199 aaKnown RBP9.6□□□□□ -0.87
COL27A1-204ENST00000477421 NPBWR2P48146 333 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 TMEM50BP56557 158 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 HBG1P69891 147 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 HBG2P69892 147 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 OR2A2Q6IF42 318 aa9.6□□□□□ -0.87
COL27A1-204ENST00000477421 HOGA1Q86XE5 327 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms