RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CRIP3Q6Q6R5 217 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4L9Q6RFH8 374 aaPredicted RBP10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 TMEM86BQ8N661 226 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 TMEM185AQ8NFB2 350 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 FAM216AQ8WUB2 273 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 EMG1Q92979 244 aaKnown RBP10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 SLAMF9Q96A28 289 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 YIPF6Q96EC8 236 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 ZNF488Q96MN9 340 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 TMED9Q9BVK6 235 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 NCOR1P1Q9H4R4 102 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4Q9UBX2 424 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 ZNF69Q9UC07 566 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 SCOCQ9UIL1 159 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 STUB1Q9UNE7 303 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 TRAV40A0A0B4J280 105 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 FUOMA2VDF0 154 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 MEGF11A6BM72 1044 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 RNF212BA8MTL3 300 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 F8VVB4 439 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 F8VWA3 439 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 SH2D1BO14796 132 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 PIN1P1O15428 100 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 ARL6IP5O75915 188 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 IGHV4-38-2P0DP08 117 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 CD37P11049 281 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 CD36P16671 472 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 BDKRB2P30411 391 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 POU3F4P49335 361 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 ARF6P62330 175 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 RPL31P62899 125 aaKnown RBP10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 GPR176Q14439 515 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 OR51T1Q8NGJ9 327 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 MRPS24Q96EL2 167 aaKnown RBP10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 SLC6A7Q99884 636 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 PCGF1Q9BSM1 259 aa10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 FBN1P35555 2871 aaKnown RBP10.17□□□□□ -0.78
CLCNKA-205ENST00000477360 CUBNO60494 3623 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 IGHV1-69DA0A0B4J2H0 117 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 IGKV1-12A0A0C4DH73 117 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 A0A1W2PQ09 198 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 H3BUI4 141 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 MGST3O14880 152 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 HAND1O96004 215 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 IGKV1D-12P01611 117 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 IGHV1-69P01742 117 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 SFTPBP07988 381 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 TMEM225BP0DP42 221 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 SELLP14151 372 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 BCL3P20749 454 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 PTGFRP43088 359 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 RANBP1P43487 201 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 NPBWR2P48146 333 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 KCNJ3P48549 501 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 UBE2E1P51965 193 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 RPL15P61313 204 aaKnown RBP10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 COL10A1Q03692 680 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 IL13RA2Q14627 380 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 GDPD3Q7L5L3 318 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 CEACAM19Q7Z692 300 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 LINC00596Q86U02 117 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 Q8N7P7 452 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 NKAIN3Q8N8D7 197 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 H1FXQ92522 213 aaKnown RBP10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 TNFRSF14Q92956 283 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 TMEM203Q969S6 136 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 MDFIQ99750 246 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 IFT22Q9H7X7 185 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 RBFOX1Q9NWB1 397 aaKnown RBP10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 TAS2R4Q9NYW5 299 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 OR14J1Q9UGF5 321 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 SSR3Q9UNL2 185 aa10.16□□□□□ -0.78
CLCNKA-205ENST00000477360 TRAV8-7A0A075B6U6 113 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 TRAV1-2A0A0B4J238 106 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 hADV38S2A0JD32 116 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 VENTXO95231 258 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 PRKACAP17612 351 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 SRMP19623 302 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 ZNF93P35789 620 aaPredicted RBP10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 CAPZA1P52907 286 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 INSL4Q14641 139 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 KRTAP24-1Q3LI83 254 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 MIDNQ504T8 468 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 HSD17B12Q53GQ0 312 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 DDI2Q5TDH0 399 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 TMEM200BQ69YZ2 307 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 C17orf107Q6ZR85 190 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 VMO1Q7Z5L0 202 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 LYPD6Q86Y78 171 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 ANKRD13BQ86YJ7 626 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 ASCC1Q8N9N2 400 aaKnown RBP10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 GPER1Q99527 375 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 UQCC2Q9BRT2 126 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 FUNDC2Q9BWH2 189 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 HEXA-AS1Q9H8Q6 139 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 EXOSC4Q9NPD3 245 aaKnown RBP10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 TXNL4BQ9NX01 149 aaKnown RBP10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 ONECUT1Q9UBC0 465 aa10.15□□□□□ -0.78
CLCNKA-205ENST00000477360 GHRLQ9UBU3 117 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms