RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SLC25A19Q9HC21 320 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 KRT84Q9NSB2 600 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 ZNF446Q9NWS9 450 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 FAM206AQ9NX38 181 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 SLC22A13Q9Y226 551 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 FAM90A8PA6NJQ4 464 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 E9PQ18 207 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 K7N7A8 449 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 M0QZK8 103 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 KRT8P05787 483 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 RPSAP08865 295 aaKnown RBP5.86□□□□□ -1.47
BRCA1-214ENST00000477152 OCM2P0CE71 109 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 OCMP0CE72 109 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-214ENST00000477152 BTF3P20290 206 aaKnown RBP5.86□□□□□ -1.47
BRCA1-214ENST00000477152 CEACAM3P40198 252 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 FUT6P51993 359 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 PRB3Q04118 309 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-214ENST00000477152 SLC34A1Q06495 639 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 SSX2Q16385 188 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 C4orf46Q504U0 113 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 HCP5Q6MZN7 132 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 CENPVQ7Z7K6 275 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-214ENST00000477152 RTN4RL2Q86UN3 420 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 GID4Q8IVV7 300 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 OR4M1Q8NGD0 313 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 OR4X2Q8NGF9 303 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 ZNF596Q8TC21 504 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 STMN2Q93045 179 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 GAL3ST2Q9H3Q3 398 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 PPP1R3EQ9H7J1 279 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 SEBOXQ9HB31 216 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-214ENST00000477152 PAPOLBQ9NRJ5 636 aaKnown RBP5.86□□□□□ -1.47
BRCA1-214ENST00000477152 TVP23BQ9NYZ1 205 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 OR52A1Q9UKL2 312 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 SIGLEC9Q9Y336 463 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 R4GMQ9 66 aa5.86□□□□□ -1.47
BRCA1-214ENST00000477152 TGP01266 2768 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 PQLC2LA1A4F0 135 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 A6NDX4 124 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 PSMD9O00233 223 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 ANOS1P23352 680 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 MPZP25189 248 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 HTR1DP28221 377 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 ZNF626Q68DY1 528 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 ZNF322Q6U7Q0 402 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-214ENST00000477152 TRAPPC6BQ86SZ2 158 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 ELMOD2Q8IZ81 293 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 OR8H2Q8N162 312 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 CD177Q8N6Q3 437 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 ZNF676Q8N7Q3 588 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 OR51D1Q8NGF3 324 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 BORCS8Q96FH0 119 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 CEP19Q96LK0 163 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 CLEC7AQ9BXN2 247 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 HES4Q9HCC6 221 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 LINC00312Q9Y6C7 94 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 SESN1Q9Y6P5 492 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 V9GYS6 101 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 VWFP04275 2813 aa5.85□□□□□ -1.47
BRCA1-214ENST00000477152 FAM230AA0A1W2PPH8 454 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 IGLV3-1P01715 115 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 IGHV1-8P0DP01 117 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 PIPP12273 146 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-214ENST00000477152 CCL3L1P16619 93 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 SLC2A5P22732 501 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ATP6V1E1P36543 226 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 MNDAP41218 407 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 CRISP1P54107 249 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ATP1B3P54709 279 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 PRRX1P54821 245 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 DLX1P56177 255 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ACTA2P62736 377 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ACTG2P63267 376 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ACTC1P68032 377 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ACTA1P68133 377 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 COL10A1Q03692 680 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 DNAL1Q4LDG9 190 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 TMEM42Q69YG0 159 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 CCDC144NLQ6NUI1 221 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ZNF782Q6ZMW2 699 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-214ENST00000477152 MEPCEQ7L2J0 689 aaKnown RBP5.84□□□□□ -1.47
BRCA1-214ENST00000477152 FAM220AQ7Z4H9 259 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 SPATA24Q86W54 205 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 EGFL6Q8IUX8 553 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 SLC35F2Q8IXU6 374 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 YIPF7Q8N8F6 280 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 OR5AU1Q8NGC0 362 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 MRPL48Q96GC5 212 aaKnown RBP5.84□□□□□ -1.47
BRCA1-214ENST00000477152 MCRIP2Q9BUT9 160 aaKnown RBP5.84□□□□□ -1.47
BRCA1-214ENST00000477152 ZNF702PQ9H963 129 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 PCDHB16Q9NRJ7 776 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 GPR173Q9NS66 373 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 CLN6Q9NWW5 311 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 VNN3Q9NY84 501 aa5.84□□□□□ -1.47
BRCA1-214ENST00000477152 UBE2J1Q9Y385 318 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-214ENST00000477152 TSSC4Q9Y5U2 329 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-214ENST00000477152 TRGV10A0A0A0MS01 117 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 TCRBV4S1A1TA0A5B7 111 aa5.84□□□□□ -1.48
BRCA1-214ENST00000477152 ODF3BA8MYP8 253 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms