RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MYRFQ9Y2G1 1151 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 LINC00312Q9Y6C7 94 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 SESN1Q9Y6P5 492 aa5.62□□□□□ -1.51
HDAC3-207ENST00000475549 FAM172BPA6NC97 362 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 SH2D7A6NKC9 451 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 E9PI62 339 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 MGST3O14880 152 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 SLC16A6O15403 523 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 FBXO24O75426 580 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 GATBO75879 557 aaKnown RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 IGLV1-47P01700 117 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 UBCP0CG48 685 aaKnown RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 CGB3P0DN86 165 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 CGB7P0DN87 165 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 FCGR1AP12314 374 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 PRKACAP17612 351 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 PRKACBP22694 351 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 CDK2P24941 298 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 PEX2P28328 305 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 POU3F4P49335 361 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 CCR9P51686 369 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 ZP1P60852 638 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 SNRPGP62308 76 aaKnown RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 CD83Q01151 205 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 BDH1Q02338 343 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 EMX1Q04741 257 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 SLC34A1Q06495 639 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 AESQ08117 197 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 C17orf58Q2M2W7 97 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 ZIK1Q3SY52 487 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 SPIN3Q5JUX0 258 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 MINOS1Q5TGZ0 78 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 PRAMEF5Q5TYX0 476 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 TMEM244Q5VVB8 128 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 C10orf99Q6UWK7 81 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 HEPN1Q6WQI6 88 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 KCTD20Q7Z5Y7 419 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 NDUFA11Q86Y39 141 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 ENTHD1Q8IYW4 607 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 CCDC54Q8NEL0 328 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 WFDC9Q8NEX5 89 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 OR5D18Q8NGL1 313 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 RFKQ969G6 155 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 FOXRED1Q96CU9 486 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 R3HDM4Q96D70 268 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 LGALS12Q96DT0 336 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 C4orf36Q96KX1 117 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 CLEC7AQ9BXN2 247 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 PRSS22Q9GZN4 317 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 COMMD4Q9H0A8 199 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF286AQ9HBT8 521 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 ENOPH1Q9UHY7 261 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 HHLA2Q9UM44 414 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 EXOGQ9Y2C4 368 aaKnown RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 GSTK1Q9Y2Q3 226 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 UBE2J1Q9Y385 318 aaPredicted RBP5.61□□□□□ -1.51
HDAC3-207ENST00000475549 MINOS1-NBL1R4GNA1 71 aa5.61□□□□□ -1.51
HDAC3-207ENST00000475549 NOTCH3Q9UM47 2321 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 A0A087X0M5 115 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 A0A1B0GX30 115 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 DAPL1A0PJW8 107 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 BUB1B-PAK6H3BSN5 160 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 J3QLW9 94 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 SLC33A1O00400 549 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-207ENST00000475549 EI24O14681 340 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 SH2D1BO14796 132 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 ZFPL1O95159 310 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 MT-ND2P03891 347 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF19P17023 458 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 HTR1DP28221 377 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 CDC42P60953 191 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 SCN1BQ07699 218 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 IL18R1Q13478 541 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 DIAPH2-AS1Q14236 149 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 LHFPL2Q6ZUX7 228 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 LHFPL3Q86UP9 236 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 Q8IYB0 196 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 OR5AU1Q8NGC0 362 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 OR13C9Q8NGT0 318 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 RHOXF1Q8NHV9 184 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 NDNFQ8TB73 568 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 SPSB1Q96BD6 273 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 OPALINQ96PE5 141 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 SLC29A1Q99808 456 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 PDCD1LG2Q9BQ51 273 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 PPIL3Q9H2H8 161 aaKnown RBP5.6□□□□□ -1.51
HDAC3-207ENST00000475549 AMBNQ9NP70 447 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 ABCB10Q9NRK6 738 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 ING3Q9NXR8 418 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF581Q9P0T4 197 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 DPM3Q9P2X0 92 aa5.6□□□□□ -1.51
HDAC3-207ENST00000475549 TRGV10A0A0A0MS01 117 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 TRAV24A0A0B4J272 114 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 A0A1W2PRX2 142 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ODAMA1E959 279 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A18PA6NE21 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A16PA6NEW6 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A20PA6NIJ5 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A9PA6NNJ1 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A12PA8MX19 464 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms