RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 Q499Y3 187 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 UBE2NLQ5JXB2 153 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 WDR59Q6PJI9 974 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 PID1Q7Z2X4 250 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 LINC00596Q86U02 117 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 GAPTQ8N292 157 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 SYS1Q8N2H4 156 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 ASCC1Q8N9N2 400 aaKnown RBP1.54□□□□□ -2.16
LTN1-204ENST00000475344 OR8S1Q8NH09 359 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 PLEKHA1Q9HB21 404 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 RHOFQ9HBH0 211 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 ACOT13Q9NPJ3 140 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 SDHAF2Q9NX18 166 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 DNAJC27Q9NZQ0 273 aa1.54□□□□□ -2.16
LTN1-204ENST00000475344 VWA8A3KMH1 1905 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 E7EQL1 145 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 C3orf84H3BNL1 204 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 XKP51811 444 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 BNIP2Q12982 314 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 SLC9A3R2Q15599 337 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 CEACAM16Q2WEN9 425 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 RESP18Q5W5W9 173 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 GLYATQ6IB77 296 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 SLC25A25Q6KCM7 469 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 CACNG8Q8WXS5 425 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 C22orf15Q8WYQ4 148 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 NRCAMQ92823 1304 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 NXF2Q9GZY0 626 aaKnown RBP1.53□□□□□ -2.16
LTN1-204ENST00000475344 TXNIPQ9H3M7 391 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 DIABLOQ9NR28 239 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 TNIKQ9UKE5 1360 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 ICOSQ9Y6W8 199 aa1.53□□□□□ -2.16
LTN1-204ENST00000475344 COL5A3P25940 1745 aaPredicted RBP1.52□□□□□ -2.17
LTN1-204ENST00000475344 MYBPHLA2RUH7 354 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 TVP23AA6NH52 213 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 F5H5P2 479 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 AQP9O43315 295 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 ZMPSTE24O75844 475 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 DHRS3O75911 302 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 SCGB1C2P0DMR2 95 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 PTNP21246 168 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 PRTN3P24158 256 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 CNTFRP26992 372 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 IL12BP29460 328 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 FUSP35637 526 aaKnown RBP eCLIP1.52□□□□□ -2.17
LTN1-204ENST00000475344 TTPAP49638 278 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 CCL23P55773 120 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 ATP5J2P56134 94 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 LGALSLQ3ZCW2 172 aaPredicted RBP1.52□□□□□ -2.17
LTN1-204ENST00000475344 CAVIN4Q5BKX8 364 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 TMPPEQ6ZT21 453 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 TPGS1Q6ZTW0 290 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 LYZL2Q7Z4W2 148 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 EIF4E3Q8N5X7 224 aaKnown RBP1.52□□□□□ -2.17
LTN1-204ENST00000475344 ZNF738Q8NE65 137 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 LGALS14Q8TCE9 139 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 SCGB1C1Q8TD33 95 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 CDKL2Q92772 493 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 OTUB2Q96DC9 234 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 ADTRPQ96IZ2 230 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 UTP23Q9BRU9 249 aaKnown RBP1.52□□□□□ -2.17
LTN1-204ENST00000475344 C14orf166Q9Y224 244 aaKnown RBP1.52□□□□□ -2.17
LTN1-204ENST00000475344 SLC22A14Q9Y267 594 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 FADS3Q9Y5Q0 445 aa1.52□□□□□ -2.17
LTN1-204ENST00000475344 PLXNB3Q9ULL4 1909 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 IGLV10-54A0A075B6I4 117 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 ZNF729A6NN14 1252 aaPredicted RBP1.51□□□□□ -2.17
LTN1-204ENST00000475344 GGTLC3B5MD39 225 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 CSTAP01040 98 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 IGHMP01871 453 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 ZNF708P17019 499 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 PRPS1L1P21108 318 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 DEKP35659 375 aaKnown RBP1.51□□□□□ -2.17
LTN1-204ENST00000475344 CARD18P57730 90 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 GPR176Q14439 515 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 C6orf183Q5T699 404 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 FAHD1Q6P587 224 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 SPNS3Q6ZMD2 512 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 GALNT10Q86SR1 603 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 ZFP82Q8N141 532 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 ATPAF2Q8N5M1 289 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 ACBD4Q8NC06 268 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 C2orf15Q8WU43 125 aaKnown RBP1.51□□□□□ -2.17
LTN1-204ENST00000475344 NELFBQ8WX92 580 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 APOBEC3DQ96AK3 386 aaPredicted RBP1.51□□□□□ -2.17
LTN1-204ENST00000475344 IGF2BP2-AS1Q96M15 143 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 GLT1D1Q96MS3 346 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 ZNF75AQ96N20 296 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 CIB1Q99828 191 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 STMN3Q9NZ72 180 aa1.51□□□□□ -2.17
LTN1-204ENST00000475344 PGPA6NDG6 321 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 K7EN84 100 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 ISLRO14498 428 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 FFAR1O14842 300 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 CDS2O95674 445 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 SOD3P08294 240 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 CCNOP22674 350 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 GCLMP48507 274 aa1.5□□□□□ -2.17
LTN1-204ENST00000475344 ZNF83P51522 516 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms