RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TUBD1Q9UJT1 453 aa15.29■□□□□ 0.04
VARS2-206ENST00000473916 FAM172BPA6NC97 362 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A10PA6NDY2 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A18PA6NE21 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A16PA6NEW6 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A20PA6NIJ5 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A8PA6NJQ4 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A7PA6NKC0 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A22PA8MWA6 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A12PA8MX19 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A5PA8MXJ8 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A23PA8MXZ1 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 HS3ST1O14792 307 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A15PP0C7V4 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A13PP0C7W8 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A14PP0C7W9 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 FAM90A24PP0C7X0 464 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 ZBTB25P24278 435 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 GCH1P30793 250 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 SNRPD2P62316 118 aaKnown RBP15.28■□□□□ 0.04
VARS2-206ENST00000473916 MPPED2Q15777 294 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 LIN54Q6MZP7 749 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 OR2T35Q8NGX2 323 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 RDH5Q92781 318 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 TMEM230Q96A57 120 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 PIGMQ9H3S5 423 aa15.28■□□□□ 0.04
VARS2-206ENST00000473916 MYOZ1Q9NP98 299 aaPredicted RBP15.28■□□□□ 0.04
VARS2-206ENST00000473916 TRAV24A0A0B4J272 114 aa15.27■□□□□ 0.04
VARS2-206ENST00000473916 H3BUI4 141 aa15.27■□□□□ 0.04
VARS2-206ENST00000473916 ERP29P30040 261 aaKnown RBP15.27■□□□□ 0.04
VARS2-206ENST00000473916 RGS7BPQ6MZT1 257 aaPredicted RBP15.27■□□□□ 0.04
VARS2-206ENST00000473916 UNQ6126/PRO20091Q6UXV3 157 aa15.27■□□□□ 0.04
VARS2-206ENST00000473916 C11orf53Q8IXP5 236 aa15.27■□□□□ 0.04
VARS2-206ENST00000473916 SUMF2Q8NBJ7 301 aa15.27■□□□□ 0.04
VARS2-206ENST00000473916 ZNF2Q9BSG1 426 aaPredicted RBP15.27■□□□□ 0.04
VARS2-206ENST00000473916 DUSP13Q9UII6 198 aa15.27■□□□□ 0.04
VARS2-206ENST00000473916 GPR132Q9UNW8 380 aa15.27■□□□□ 0.04
VARS2-206ENST00000473916 ATXN7O15265 892 aaPredicted RBP15.27■□□□□ 0.03
VARS2-206ENST00000473916 ERVK11-1P61568 191 aa15.27■□□□□ 0.03
VARS2-206ENST00000473916 MPV17LQ2QL34 196 aa15.27■□□□□ 0.03
VARS2-206ENST00000473916 ZNF660Q6AZW8 331 aaPredicted RBP15.27■□□□□ 0.03
VARS2-206ENST00000473916 ZCCHC14Q8WYQ9 949 aaKnown RBP15.27■□□□□ 0.03
VARS2-206ENST00000473916 NRIP2Q9BQI9 281 aa15.27■□□□□ 0.03
VARS2-206ENST00000473916 RTBDNQ9BSG5 229 aaPredicted RBP15.27■□□□□ 0.03
VARS2-206ENST00000473916 PRR13Q9NZ81 148 aa15.27■□□□□ 0.03
VARS2-206ENST00000473916 NOP16Q9Y3C1 178 aaKnown RBP15.27■□□□□ 0.03
VARS2-206ENST00000473916 COL6A6A6NMZ7 2263 aa15.27■□□□□ 0.03
VARS2-206ENST00000473916 TRGV8A0A0C4DH27 118 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 WNT9BO14905 357 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 CRYAAP02489 173 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 GSTT2P0CG29 244 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 PGA5P0DJD9 388 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 OR5H8P0DN80 308 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 VAMP1P23763 118 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 UNQ6494/PRO21346Q6UXR6 183 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 LYG2Q86SG7 212 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 C12orf45Q8N5I9 185 aaPredicted RBP15.26■□□□□ 0.03
VARS2-206ENST00000473916 ZFAND1Q8TCF1 268 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 NEK7Q8TDX7 302 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 CASTOR1Q8WTX7 329 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 SYT3Q9BQG1 590 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 WDR13Q9H1Z4 485 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 CHMP1AQ9HD42 196 aaPredicted RBP15.26■□□□□ 0.03
VARS2-206ENST00000473916 UFSP2Q9NUQ7 469 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 JKAMPQ9P055 326 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 MGAT4AQ9UM21 535 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 EDARQ9UNE0 448 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 C9orf170A2RU37 121 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 CEACAM18A8MTB9 384 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 TFF1P04155 84 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 GLRA1P23415 457 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 CEBPDP49716 269 aaPredicted RBP15.26■□□□□ 0.03
VARS2-206ENST00000473916 NKX6-1P78426 367 aaPredicted RBP15.26■□□□□ 0.03
VARS2-206ENST00000473916 RBPJQ06330 500 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 KLRB1Q12918 225 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 Q6P435 159 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 C20orf204Q6ZNR8 217 aa15.26■□□□□ 0.03
VARS2-206ENST00000473916 PEG10Q86TG7 708 aaKnown RBP15.26■□□□□ 0.03
VARS2-206ENST00000473916 C16orf97H3BN30 126 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 CCSO14618 274 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 OR2A4O95047 310 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 NAPSAO96009 420 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 DNASE1P24855 282 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 FPR2P25090 351 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 SPRNQ5BIV9 151 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 LY6G6FQ5SQ64 297 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 TMEM211Q6ICI0 200 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 TMEM17Q86X19 198 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 C9orf62Q8N4C0 152 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 OR2A7Q96R45 310 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 DMRTA2Q96SC8 542 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 POLDIP2Q9Y2S7 368 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 ROS1P08922 2347 aa15.25■□□□□ 0.03
VARS2-206ENST00000473916 A6NLC8 198 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 SIRPB1O00241 398 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 SLC22A5O76082 557 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 NXPH2O95156 264 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 THBDP07204 575 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 ZNF44P15621 663 aa15.24■□□□□ 0.03
VARS2-206ENST00000473916 CD34P28906 385 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms