RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 LCATP04180 440 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 RGS19P49795 217 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 VAMP2P63027 116 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 ZNF343Q6P1L6 599 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 FADS6Q8N9I5 356 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 UCN2Q96RP3 112 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 DOK5Q9P104 306 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 ST3GAL6Q9Y274 331 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 ABCA7Q8IZY2 2146 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 BTBD17A6NE02 478 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 H0YL77 283 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 PITX3O75364 302 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 PYY3Q5JQD4 70 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 ZNF429Q86V71 674 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 ZNF610Q8N9Z0 462 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 OR6C1Q96RD1 312 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 MAGT1Q9H0U3 335 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 PLEKHF2Q9H8W4 249 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 GAR1Q9NY12 217 aaKnown RBP12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 SLC7A11Q9UPY5 501 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 UBE2J1Q9Y385 318 aaPredicted RBP12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 CABIN1Q9Y6J0 2220 aa12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 ASCC3Q8N3C0 2202 aaKnown RBP12.34□□□□□ -0.43
NHLRC3-204ENST00000473371 ZNF729A6NN14 1252 aaPredicted RBP12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 TRDCB7Z8K6 153 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 MPPED1O15442 326 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 SSSCA1O60232 199 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 CDS2O95674 445 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 MALLQ13021 153 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 LHFPL2Q6ZUX7 228 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 ZNF695Q8IW36 515 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 ZNF442Q9H7R0 627 aa12.33□□□□□ -0.43
NHLRC3-204ENST00000473371 IGKV1-12A0A0C4DH73 117 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 HSD17B6O14756 317 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 SCRG1O75711 98 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 IGKV1D-12P01611 117 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 LTBRP36941 435 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 DLK1P80370 383 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 H3F3AP84243 136 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 WDR74Q6RFH5 385 aaPredicted RBP12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF574Q6ZN55 896 aaPredicted RBP12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF600Q6ZNG1 722 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM123Q8N131 208 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 Q8WTZ3 238 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 IFITM10A6NMD0 228 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 TP53I11O14683 189 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 SLC34A2O95436 690 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 PPYP01298 95 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 CD63P08962 238 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 CXCL1P09341 107 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 SRPXP78539 464 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 ELOBQ15370 118 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 OR8G5Q8NG78 346 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 OR5C1Q8NGR4 320 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 C11orf1Q9H5F2 150 aa12.33□□□□□ -0.44
NHLRC3-204ENST00000473371 EML6Q6ZMW3 1958 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 NRASP01111 189 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 SPIN3Q5JUX0 258 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 RAET1LQ5VY80 246 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF774Q6NX45 483 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 SLC25A45Q8N413 288 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM252Q8N6L7 170 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM171Q8WVE6 324 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 SPIN2AQ99865 258 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 SPIN2BQ9BPZ2 258 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 TREM2Q9NZC2 230 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 TERTO14746 1132 aaKnown RBP12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 PDCD6O75340 191 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 CST7O76096 145 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 SCAF4O95104 1147 aaKnown RBP12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 VAMP5O95183 116 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 RAB35Q15286 201 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 ASCL4Q6XD76 172 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 CYB561D1Q8N8Q1 229 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF383Q8NA42 475 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 TVP23CQ96ET8 276 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM222Q9H0R3 208 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 A0A087WWC5 75 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 SLC33A1O00400 549 aaPredicted RBP12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 DYNLT3P51808 116 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 ICAM4Q14773 271 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 FAM27BQ5VT28 67 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 PARPBPQ9NWS1 579 aa12.32□□□□□ -0.44
NHLRC3-204ENST00000473371 CCDC163A0A0D9SF12 145 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 NDUFS6O75380 124 aaKnown RBP12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 TCN2P20062 427 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 CRYGSP22914 178 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 CXorf66Q5JRM2 361 aaPredicted RBP12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 AKR1C8PQ5T2L2 129 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms