RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OPN1MWP04001 364 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 OPN1MW2P0DN77 364 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 OPN1MW3P0DN78 364 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 P2RX3P56373 397 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 ALKBH1Q13686 389 aaKnown RBP12.31□□□□□ -0.44
VTI1A-203ENST00000472892 GALEQ14376 348 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 KPNB1Q14974 876 aaKnown RBP12.31□□□□□ -0.44
VTI1A-203ENST00000472892 HIST2H2BDQ6DRA6 164 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 ZBTB49Q6ZSB9 765 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 RNF144BQ7Z419 303 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 TMEM219Q86XT9 240 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 SAXO1Q8IYX7 474 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 CBR4Q8N4T8 237 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 OR13C3Q8NGS6 347 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 WIPF2Q8TF74 440 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-203ENST00000472892 CORO2AQ92828 525 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 C4orf36Q96KX1 117 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 MYCBPQ99417 103 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-203ENST00000472892 CLEC7AQ9BXN2 247 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 RHOFQ9HBH0 211 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 HILPDAQ9Y5L2 63 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 TET2Q6N021 2002 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-203ENST00000472892 DSCAML1Q8TD84 2053 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 A0A0G2JK05 382 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 MMP23AO75900 390 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 OR2H2O95918 312 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 OCM2P0CE71 109 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 OCMP0CE72 109 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 JUNBP17275 347 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 SNU13P55769 128 aaKnown RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 HABP2Q14520 560 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 C1QL4Q86Z23 238 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 RHOXF1Q8NHV9 184 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 RFT1Q96AA3 541 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 MRPL48Q96GC5 212 aaKnown RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 SPACA5Q96QH8 159 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 ZNF649Q9BS31 505 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 PRSS22Q9GZN4 317 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 COMMD4Q9H0A8 199 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 ZCCHC4Q9H5U6 513 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 ISG20L2Q9H9L3 353 aaKnown RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 EXOSC4Q9NPD3 245 aaKnown RBP12.3□□□□□ -0.44
VTI1A-203ENST00000472892 MYRFQ9Y2G1 1151 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 GSTK1Q9Y2Q3 226 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 GMPPBQ9Y5P6 360 aa12.3□□□□□ -0.44
VTI1A-203ENST00000472892 FUOMA2VDF0 154 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 SIRPB1O00241 398 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 MPZL2O60487 215 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 RPSAP08865 295 aaKnown RBP12.29□□□□□ -0.44
VTI1A-203ENST00000472892 DBTP11182 482 aaKnown RBP12.29□□□□□ -0.44
VTI1A-203ENST00000472892 HTR1DP28221 377 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 BLCAPP62952 87 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 SLC34A1Q06495 639 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 OR52W1Q6IF63 320 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 Q6P435 159 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 HEPN1Q6WQI6 88 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 TRAPPC6BQ86SZ2 158 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 RTN4RL2Q86UN3 420 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 C10orf67Q8IYJ2 551 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 OR4P4Q8NGL7 312 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 OR13C9Q8NGT0 318 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 Q96MT0 163 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 ALG8Q9BVK2 526 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 WNT10AQ9GZT5 417 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 NEK6Q9HC98 313 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 TAS2R3Q9NYW6 316 aa12.29□□□□□ -0.44
VTI1A-203ENST00000472892 TRGV10A0A0A0MS01 117 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 F2RL2O00254 374 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 ZFPL1O95159 310 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 FADS2O95864 444 aaKnown RBP12.28□□□□□ -0.44
VTI1A-203ENST00000472892 CD28P10747 220 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 GLIPR1P48060 266 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 EMX1Q04741 257 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-203ENST00000472892 AESQ08117 197 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
VTI1A-203ENST00000472892 Q6ZS46 218 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 SERPINA12Q8IW75 414 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 PARP16Q8N5Y8 322 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 CHST4Q8NCG5 386 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 OR5D18Q8NGL1 313 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 OR5D14Q8NGL3 314 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 SLC29A1Q99808 456 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 GAL3ST2Q9H3Q3 398 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 INPP5EQ9NRR6 644 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 MRPS18AQ9NVS2 196 aaKnown RBP12.28□□□□□ -0.44
VTI1A-203ENST00000472892 ERVK13-1Q9NX77 482 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 DPM3Q9P2X0 92 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 PCDHGB5Q9Y5G0 923 aa12.28□□□□□ -0.44
VTI1A-203ENST00000472892 TMEM212A6NML5 194 aa12.27□□□□□ -0.45
VTI1A-203ENST00000472892 E9PI62 339 aa12.27□□□□□ -0.45
VTI1A-203ENST00000472892 H3BUI4 141 aa12.27□□□□□ -0.45
VTI1A-203ENST00000472892 FBXO24O75426 580 aa12.27□□□□□ -0.45
VTI1A-203ENST00000472892 IGLV1-47P01700 117 aa12.27□□□□□ -0.45
VTI1A-203ENST00000472892 CSN2P05814 226 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms