RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SLC35D3Q5M8T2 416 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 TPTE2P1Q5T6R2 138 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 SLC25A26Q70HW3 274 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 SBSPONQ8IVN8 264 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 KLHL30-AS1Q8NEE0 82 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 CEP19Q96LK0 163 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 CITED4Q96RK1 184 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 MAGIXQ9H6Y5 334 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 RBFOX1Q9NWB1 397 aaKnown RBP7.33□□□□□ -1.24
VCL-204ENST00000472585 MRM2Q9UI43 246 aaKnown RBP7.33□□□□□ -1.24
VCL-204ENST00000472585 OR52A1Q9UKL2 312 aa7.33□□□□□ -1.24
VCL-204ENST00000472585 STARD9Q9P2P6 4700 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 IGKV1-9A0A0C4DH69 117 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 BUB1B-PAK6H3BSN5 160 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 SNX3O60493 162 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 ENTPD6O75354 484 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 ZNF254O75437 659 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 CGB3P0DN86 165 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 CGB7P0DN87 165 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 OSMP13725 252 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 BCL3P20749 454 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 GABRR1P24046 479 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 CDK2P24941 298 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 CD34P28906 385 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 ERP29P30040 261 aaKnown RBP7.32□□□□□ -1.24
VCL-204ENST00000472585 BRS3P32247 399 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 OR3A4PP47883 348 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 RIDAP52758 137 aaKnown RBP7.32□□□□□ -1.24
VCL-204ENST00000472585 EFNB1P98172 346 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 IL18R1Q13478 541 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 ODF4Q2M2E3 257 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 C17orf58Q2M2W7 97 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 HLA-DRB5Q30154 266 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 DEFB136Q30KP8 78 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 LCN1P1Q5VSP4 162 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 HEPN1Q6WQI6 88 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 SSX6Q7RTT6 188 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 OR5M8Q8NGP6 311 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 CORO2AQ92828 525 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 ISOC1Q96CN7 298 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 ZFP57Q9NU63 452 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 IKZF2Q9UKS7 526 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 GTF2A1LQ9UNN4 478 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 ZNF256Q9Y2P7 627 aaPredicted RBP7.32□□□□□ -1.24
VCL-204ENST00000472585 R4GMQ9 66 aa7.32□□□□□ -1.24
VCL-204ENST00000472585 IGKV1-12A0A0C4DH73 117 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 RBMY1BA6NDE4 496 aaKnown RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 RBMY1EA6NEQ0 496 aaKnown RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 LEUTXA8MZ59 168 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 LOC110117498-PIK3R3F6TDL0 507 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 M0R129 80 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 PRKYO43930 277 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 E2F6O75461 281 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 DNAJC8O75937 253 aaPredicted RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 IGKV1D-12P01611 117 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 IGHV3-7P01780 117 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 HMGN1P05114 100 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 RBMY1DP0C7P1 496 aaKnown RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 PEX2P28328 305 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 ARHGDIBP52566 201 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 SNU13P55769 128 aaKnown RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 P2RX3P56373 397 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 CXCR4P61073 352 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 CBX1P83916 185 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 AESQ08117 197 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 HNF4GQ14541 408 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 ZNF146Q15072 292 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 ZNF829Q3KNS6 432 aaPredicted RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 ZNF322Q6U7Q0 402 aaPredicted RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 RTN4RL2Q86UN3 420 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 C5orf56Q8N8D9 126 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 ASB17Q8WXJ9 295 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 EMG1Q92979 244 aaKnown RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 COQ2Q96H96 371 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 DCLRE1BQ9H816 532 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 ADGRL4Q9HBW9 690 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 SLC25A19Q9HC21 320 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 PAPOLBQ9NRJ5 636 aaKnown RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 TVP23BQ9NYZ1 205 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 TAGLN3Q9UI15 199 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 SLC7A11Q9UPY5 501 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 UBE2J1Q9Y385 318 aaPredicted RBP7.31□□□□□ -1.24
VCL-204ENST00000472585 KIAA2026Q5HYC2 2103 aa7.31□□□□□ -1.24
VCL-204ENST00000472585 A0A087X0M5 115 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 A0A1B0GX30 115 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 A0A1W2PPI3 338 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 DHRS7CA6NNS2 312 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 SEC14L6B5MCN3 397 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 CCL24O00175 119 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 SIRPB1O00241 398 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 MGST3O14880 152 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 RPP14O95059 124 aaKnown RBP7.3□□□□□ -1.24
VCL-204ENST00000472585 OR2H2O95918 312 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 CST1P01037 141 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 EPHA2P29317 976 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 FUT6P51993 359 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 TRIM25Q14258 630 aaKnown RBP7.3□□□□□ -1.24
VCL-204ENST00000472585 SNAPC1Q16533 368 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 SPATS1Q496A3 300 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 BCL2L15Q5TBC7 163 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms