RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 LINC01590Q5TEZ4 76 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 METTL21CQ5VZV1 264 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 AQP11Q8NBQ7 271 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 OR6Q1Q8NGQ2 317 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 OR10X1Q8NGY0 326 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 OTOSQ8NHW6 89 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 IL17DQ8TAD2 202 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 TEX47Q8TBZ9 253 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 ARPC1AQ92747 370 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 ITFG2Q969R8 447 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 EME1Q96AY2 570 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 OR4C12Q96R67 309 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 FUZQ9BT04 418 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 MROQ9BYG7 248 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 NMNAT2Q9BZQ4 307 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 ALX4Q9H161 411 aaPredicted RBP5.36□□□□□ -1.55
HDAC1-204ENST00000471488 GNB4Q9HAV0 340 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 HES4Q9HCC6 221 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 SAR1AQ9NR31 198 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 RBFOX1Q9NWB1 397 aaKnown RBP5.36□□□□□ -1.55
HDAC1-204ENST00000471488 MTCH1Q9NZJ7 389 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 GSTK1Q9Y2Q3 226 aa5.36□□□□□ -1.55
HDAC1-204ENST00000471488 A0A0U1RQV5 110 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 FUOMA2VDF0 154 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 CCRL2O00421 344 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 MGST3O14880 152 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 FGF16O43320 207 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 EDF1O60869 148 aaKnown RBP5.35□□□□□ -1.55
HDAC1-204ENST00000471488 CCNB2O95067 398 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 CYB5AP00167 134 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 IGLV1-47P01700 117 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 ELANEP08246 267 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 OCM2P0CE71 109 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 OCMP0CE72 109 aaPredicted RBP5.35□□□□□ -1.55
HDAC1-204ENST00000471488 SLC2A2P11168 524 aaPredicted RBP5.35□□□□□ -1.55
HDAC1-204ENST00000471488 ZNF44P15621 663 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 BCL3P20749 454 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 OR3A1P47881 315 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 PITPNAQ00169 270 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 MFGE8Q08431 387 aaPredicted RBP5.35□□□□□ -1.55
HDAC1-204ENST00000471488 IL24Q13007 206 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 MADCAM1Q13477 382 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 PMS2P11Q13670 270 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 ZNF829Q3KNS6 432 aaPredicted RBP5.35□□□□□ -1.55
HDAC1-204ENST00000471488 KRBOX4Q5JUW0 171 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 HEPN1Q6WQI6 88 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 PLEKHG7Q6ZR37 379 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 RASSF6Q6ZTQ3 369 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 TRPM8Q7Z2W7 1104 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 ZNF454Q8N9F8 522 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 OR9G1Q8NH87 305 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 DLX4Q92988 240 aaPredicted RBP5.35□□□□□ -1.55
HDAC1-204ENST00000471488 PYURFQ96I23 114 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 DHRS1Q96LJ7 313 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 KCTD7Q96MP8 289 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 BTBD10Q9BSF8 475 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 EXOSC4Q9NPD3 245 aaKnown RBP5.35□□□□□ -1.55
HDAC1-204ENST00000471488 IL1RAPQ9NPH3 570 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 PCDHB16Q9NRJ7 776 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 FAM206AQ9NX38 181 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 ACTR3BQ9P1U1 418 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 KIAA1456Q9P272 454 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 BAIAP2Q9UQB8 552 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 WSB1Q9Y6I7 421 aa5.35□□□□□ -1.55
HDAC1-204ENST00000471488 A0A1W2PPI3 338 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 CXorf65A6NEN9 183 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 OOSP1A8MZH6 123 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 LOC110117498-PIK3R3F6TDL0 507 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 LY6LH3BQJ8 138 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 DLGAP1O14490 977 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 SH2D1BO14796 132 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 MAGEB4O15481 346 aaPredicted RBP5.34□□□□□ -1.55
HDAC1-204ENST00000471488 COX4I1P13073 169 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 ATP6V1B1P15313 513 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 FSTP19883 344 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 NPBWR2P48146 333 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 RIDAP52758 137 aaKnown RBP5.34□□□□□ -1.55
HDAC1-204ENST00000471488 ISL1P61371 349 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 ERVK11-1P61568 191 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 HAGHQ16775 308 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 LCN1P1Q5VSP4 162 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 SATL1Q86VE3 508 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 THNSL2Q86YJ6 484 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 ANKRD13BQ86YJ7 626 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 ENTHD1Q8IYW4 607 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 FAM58AQ8N1B3 248 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 RFESDQ8TAC1 157 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 CASTOR1Q8WTX7 329 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 RFT1Q96AA3 541 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 BORCS8Q96FH0 119 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 ATP6V1G3Q96LB4 118 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 HOPXQ9BPY8 73 aaPredicted RBP5.34□□□□□ -1.55
HDAC1-204ENST00000471488 HSPB9Q9BQS6 159 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 SIKE1Q9BRV8 207 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 PKIBQ9C010 78 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 ABCG5Q9H222 651 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 NEK6Q9HC98 313 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 PARP11Q9NR21 331 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 CMC2Q9NRP2 79 aa5.34□□□□□ -1.55
HDAC1-204ENST00000471488 MRGBPQ9NV56 204 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms