RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PMS2P3Q13401 168 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 MED21Q13503 144 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 GINS1Q14691 196 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PTGES3Q15185 160 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 LINC00303Q3SY05 128 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TMEM176BQ3YBM2 270 aaPredicted RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 C6orf52Q5T4I8 152 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 RAET1LQ5VY80 246 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 WDR25Q64LD2 544 aaPredicted RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 SMARCD3Q6STE5 483 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TMPPEQ6ZT21 453 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TMEM251Q8N6I4 163 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 OR52L1Q8NGH7 329 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 OR5J2Q8NH18 312 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PFN4Q8NHR9 129 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 NEIL3Q8TAT5 605 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TEX47Q8TBZ9 253 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TRUB1Q8WWH5 349 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 CYGBQ8WWM9 190 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 SLC25A36Q96CQ1 311 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 MBOAT4Q96T53 435 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 APOL4Q9BPW4 351 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 ANKRD60Q9BZ19 345 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PRRG3Q9BZD7 231 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PRORYQ9H606 182 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 ZDHHC11Q9H8X9 412 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 SLC25A19Q9HC21 320 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 TIGARQ9NQ88 270 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 C1orf123Q9NWV4 160 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 PAQR5Q9NXK6 330 aaPredicted RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 MRPL39Q9NYK5 338 aaKnown RBP3.8□□□□□ -1.8
CCDC39-202ENST00000471307 MLXQ9UH92 298 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 B9D1Q9UPM9 204 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 BAIAP2Q9UQB8 552 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 GMPPBQ9Y5P6 360 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 CDH10Q9Y6N8 788 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 HSPE1-MOB4S4R3N1 261 aa3.8□□□□□ -1.8
CCDC39-202ENST00000471307 SVILO95425 2214 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ZZEF1O43149 2961 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 TLN1Q9Y490 2541 aaKnown RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 IGHV3OR16-12A0A075B7B8 117 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 TRGV5A0A0B4J1U4 118 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF716A6NP11 495 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 FAM166BA8MTA8 275 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 NPIPA2E9PIF3 369 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 K7EM74 188 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 M0R3G1 203 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 SULT2B1O00204 365 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 PLPP3O14495 311 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 IMPA2O14732 288 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 BCKDKO14874 412 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ARPC3O15145 178 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 NDUFB2O95178 105 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 PRB2P02812 416 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF735P0CB33 412 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 HSMCR30P0CW71 290 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 CPN1P15169 458 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 PGAM2P15259 253 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF24P17028 368 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 GTF2E2P29084 291 aaKnown RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 GRPRP30550 384 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 RPL4P36578 427 aaKnown RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 RFC3P40938 356 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 CARD18P57730 90 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR2B6P58173 313 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 SNRPGP62308 76 aaKnown RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 RPS4XP62701 263 aaKnown RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 SLC35A1P78382 337 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 H3F3AP84243 136 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 P2RY14Q15391 338 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR7A5Q15622 319 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ACSF3Q4G176 576 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF691Q5VV52 312 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 SLX4IPQ5VYV7 408 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 HBMQ6B0K9 141 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 CASP12Q6UXS9 341 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ZNF620Q6ZNG0 422 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 LHFPL4Q7Z7J7 247 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 TGIF2LXQ8IUE1 241 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 C8orf59Q8N0T1 100 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 LINC00518Q8N0U6 118 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ATP6V1C2Q8NEY4 427 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR2T33Q8NG76 320 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR5AU1Q8NGC0 362 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR5M1Q8NGP8 315 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR51A7Q8NH64 312 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 FANK1Q8TC84 345 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 EMG1Q92979 244 aaKnown RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 CPNE4Q96A23 557 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 PNPLA2Q96AD5 504 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ZHX1-C8orf76Q96EF9 292 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 ARL5BQ96KC2 179 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 SLC38A2Q96QD8 506 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR5B2Q96R09 309 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 GPX7Q96SL4 187 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-202ENST00000471307 PITX2Q99697 317 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 TSSK6Q9BXA6 273 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR11A1Q9GZK7 315 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 DEFB127Q9H1M4 99 aa3.79□□□□□ -1.8
CCDC39-202ENST00000471307 OR52D1Q9H346 318 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms