RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 SLC7A5P1Q8MH63 180 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 CADM3Q8N126 398 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 BATF2Q8N1L9 274 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 FTMTQ8N4E7 242 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 SAMD12Q8N8I0 201 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 OR4M2Q8NGB6 313 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 OR4M1Q8NGD0 313 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 OR5A2Q8NGI9 324 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 OR8S1Q8NH09 359 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 THRSPQ92748 146 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 SLC25A28Q96A46 364 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 SPSB1Q96BD6 273 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ELMOD3Q96FG2 381 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 RNF170Q96K19 258 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 C1orf147Q96MC9 270 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-208ENST00000470268 OR2V2Q96R30 315 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 TRAF4Q9BUZ4 470 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-208ENST00000470268 OR51I2Q9H344 312 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 PALMDQ9NP74 551 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 CBLN4Q9NTU7 201 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 CKLFQ9UBR5 152 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 CACNG2Q9Y698 323 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ROS1P08922 2347 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 ICE1Q9Y2F5 2266 aa3.98□□□□□ -1.77
SF3B1-208ENST00000470268 A0A1W2PP11 408 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PLSCR5A0PG75 271 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 GAGE12BA1L429 117 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 GAGE12HA6NDE8 117 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ANXA2P2A6NMY6 339 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 IFITM5A6NNB3 132 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 F8VVB4 439 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 F8VWA3 439 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 OVOL3O00110 214 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CDIPTO14735 213 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SPRY1O43609 319 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ANGPTL7O43827 346 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 LY6HO94772 140 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 GOSR1O95249 250 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PTBP3O95758 552 aaKnown RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ALDOBP05062 364 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ADH4P08319 380 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF93P35789 620 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CDKN1AP38936 164 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CD200P41217 278 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 HAAOP46952 286 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 OR3A4PP47883 348 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 FUT6P51993 359 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MTCP1P56278 107 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 GNG3P63215 75 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF45Q02386 682 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 IL18Q14116 193 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 C1orf100Q5SVJ3 147 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 C6orf183Q5T699 404 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 OR10K2Q6IF99 312 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MZT2BQ6NZ67 158 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MZT2AQ6P582 158 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 HAGHLQ6PII5 290 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 LINC00299Q6ZSB3 139 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF826PQ6ZT77 177 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 NRARPQ7Z6K4 114 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 TMEM200AQ86VY9 491 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 TPRA1Q86W33 373 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 FBXL14Q8N1E6 418 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 JAGN1Q8N5M9 183 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ITLN1Q8WWA0 313 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 C14orf79Q96F83 325 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 BORCS8Q96FH0 119 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF488Q96MN9 340 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 C8orf49Q96NF6 230 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 WDFY2Q96P53 400 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CACNG6Q9BXT2 260 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MMP28Q9H239 520 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 METTL17Q9H7H0 456 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 UFSP2Q9NUQ7 469 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 TREM2Q9NZC2 230 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 V9GY05 133 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 VPS13CQ709C8 3753 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 ABCA4P78363 2273 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 OR5B21A6NL26 309 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 FAM25AB3EWG3 89 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 FAM25CB3EWG5 89 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 FAM25GB3EWG6 89 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 LYNX1G3V0Z9 82 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 AIPO00170 330 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SLC17A2O00624 439 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PLA2G10O15496 165 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SFTPBP07988 381 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CD55P08174 381 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 LYNX1P0DP58 116 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 CALCBP10092 127 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PRKACBP22694 351 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 MPZP25189 248 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PTGFRP43088 359 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 NPBWR2P48146 333 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 POU3F4P49335 361 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SRP9P49458 86 aaKnown RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 SNRPD2P62316 118 aaKnown RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 QRFPP83859 136 aa3.97□□□□□ -1.77
SF3B1-208ENST00000470268 TNFAIP6P98066 277 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-208ENST00000470268 PDZK1IP1Q13113 114 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms