RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 JUNBP17275 347 aaPredicted RBP14.04□□□□□ -0.16
COL7A1-208ENST00000470076 PDZK1IP1Q13113 114 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 FDX2Q6P4F2 183 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 C16orf82Q7Z2V1 217 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 OR4P4Q8NGL7 312 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 FGGYQ96C11 551 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 OPALINQ96PE5 141 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 MBOAT4Q96T53 435 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 GAL3ST2Q9H3Q3 398 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 EXOSC4Q9NPD3 245 aaKnown RBP14.04□□□□□ -0.16
COL7A1-208ENST00000470076 IMPAD1Q9NX62 359 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 FAM53CQ9NYF3 392 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 FRRS1LQ9P0K9 344 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 PCDHGB5Q9Y5G0 923 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 TRGV10A0A0A0MS01 117 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 ADARB2-AS1A8MUL3 147 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 SIRPB1O00241 398 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 CCR9P51686 369 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 SNU13P55769 128 aaKnown RBP14.03□□□□□ -0.16
COL7A1-208ENST00000470076 OXLD1Q5BKU9 147 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 Q6ZS46 218 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 RTN4RL2Q86UN3 420 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 ZNF596Q8TC21 504 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 AKR1E2Q96JD6 320 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 OCSTAMPQ9BR26 566 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 RHOFQ9HBH0 211 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 DPM3Q9P2X0 92 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 HHLA2Q9UM44 414 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 GSTK1Q9Y2Q3 226 aa14.03□□□□□ -0.16
COL7A1-208ENST00000470076 DAPL1A0PJW8 107 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 SAC3D1A6NKF1 404 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 J3QRE1 110 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 SLC16A6O15403 523 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 MMP23AO75900 390 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 OR2H2O95918 312 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 PRB2P02812 416 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-208ENST00000470076 MT-ND2P03891 347 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 HTR1AP08908 422 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 CALCBP10092 127 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 LMO1P25800 156 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 BRS3P32247 399 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 ARHGDIBP52566 201 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 NANOS3P60323 173 aaKnown RBP14.02□□□□□ -0.17
COL7A1-208ENST00000470076 BDH1Q02338 343 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 SLC25A30Q5SVS4 291 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 HEPN1Q6WQI6 88 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 Q6ZPA2 131 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 ABHD12Q8N2K0 398 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 CORO2AQ92828 525 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 RNFT2Q96EX2 444 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 COMMD4Q9H0A8 199 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 LIN7BQ9HAP6 207 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 TAS2R3Q9NYW6 316 aa14.02□□□□□ -0.17
COL7A1-208ENST00000470076 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-208ENST00000470076 IGKV1-12A0A0C4DH73 117 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 PIN1P1O15428 100 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 KDM4BO94953 1096 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 IGKV1D-12P01611 117 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 CDK2P24941 298 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 SNRPGP62308 76 aaKnown RBP14.01□□□□□ -0.17
COL7A1-208ENST00000470076 TMEM95Q3KNT9 176 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 PRAMEF5Q5TYX0 476 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 MEDAGQ5VYS4 303 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 SAXO1Q8IYX7 474 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 OR13C3Q8NGS6 347 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 CAPSLQ8WWF8 208 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 RFT1Q96AA3 541 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 HRASLS5Q96KN8 279 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 NEK6Q9HC98 313 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 NECAP2Q9NVZ3 263 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 ORC6Q9Y5N6 252 aa14.01□□□□□ -0.17
COL7A1-208ENST00000470076 DNAH3Q8TD57 4116 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 SNTNA6NMZ2 147 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 LEUTXA8MZ59 168 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 CIB2O75838 187 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 IGLV1-47P01700 117 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 ALPLP05186 524 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 CSN2P05814 226 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 CD34P28906 385 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 CD83Q01151 205 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 AESQ08117 197 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 KPNB1Q14974 876 aaKnown RBP14□□□□□ -0.17
COL7A1-208ENST00000470076 ACBD7Q8N6N7 88 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 CHST4Q8NCG5 386 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 OR5AU1Q8NGC0 362 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 OR51A4Q8NGJ6 313 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 OR13C9Q8NGT0 318 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 OR10AC1Q8NH08 325 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 SGCDQ92629 289 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 STMN2Q93045 179 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 CREB3L1Q96BA8 519 aa14□□□□□ -0.17
COL7A1-208ENST00000470076 MRPL48Q96GC5 212 aaKnown RBP14□□□□□ -0.17
COL7A1-208ENST00000470076 MYCBPQ99417 103 aaPredicted RBP14□□□□□ -0.17
COL7A1-208ENST00000470076 ODAMA1E959 279 aa13.99□□□□□ -0.17
COL7A1-208ENST00000470076 OR4C45A6NMZ5 311 aa13.99□□□□□ -0.17
COL7A1-208ENST00000470076 ZNF44P15621 663 aa13.99□□□□□ -0.17
COL7A1-208ENST00000470076 CEACAM3P40198 252 aa13.99□□□□□ -0.17
COL7A1-208ENST00000470076 GLIPR1P48060 266 aa13.99□□□□□ -0.17
COL7A1-208ENST00000470076 OR5D18Q8NGL1 313 aa13.99□□□□□ -0.17
COL7A1-208ENST00000470076 MRAPQ8TCY5 172 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms