RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 CARD17Q5XLA6 110 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 SLC22A24Q8N4F4 322 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 ASB10Q8WXI3 467 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 FGGYQ96C11 551 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 CYYR1Q96J86 154 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 FBLN5Q9UBX5 448 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 LSM5Q9Y4Y9 91 aaKnown RBP12.1□□□□□ -0.47
GPC1-208ENST00000469694 CYB5BO43169 146 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
GPC1-208ENST00000469694 P2RY1P47900 373 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 DMRTC1Q5HYR2 192 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 AKR1C8PQ5T2L2 129 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 C1orf123Q9NWV4 160 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 VSX1Q9NZR4 365 aaPredicted RBP12.1□□□□□ -0.47
GPC1-208ENST00000469694 IL17BQ9UHF5 180 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 A0A0A6YYD4 124 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 A0A1B0GV50 99 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 MED19A0JLT2 244 aaPredicted RBP12.09□□□□□ -0.47
GPC1-208ENST00000469694 TNFSF15O95150 251 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 UBE2KP61086 200 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 SLC25A53Q5H9E4 307 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 CYB5R2Q6BCY4 276 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 BEND2Q8NDZ0 799 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 SNIP1Q8TAD8 396 aaKnown RBP12.09□□□□□ -0.47
GPC1-208ENST00000469694 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 LIN37Q96GY3 246 aaPredicted RBP12.09□□□□□ -0.47
GPC1-208ENST00000469694 NOL4LQ96MY1 436 aaPredicted RBP12.09□□□□□ -0.47
GPC1-208ENST00000469694 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 ANGPTL4Q9BY76 406 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 LPAR5Q9H1C0 372 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 UNKLQ9H9P5 680 aaKnown RBP12.09□□□□□ -0.47
GPC1-208ENST00000469694 ALKBH4Q9NXW9 302 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 KLHL13Q9P2N7 655 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 SLC5A6Q9Y289 635 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 P2RY10O00398 339 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 PHOX2AO14813 284 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 HCKP08631 526 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 SERPINA2P20848 420 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 SSPNQ14714 243 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 GGNBP1Q5YKI7 109 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 FNDC9Q8TBE3 224 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 FRZBQ92765 325 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 EMG1Q92979 244 aaKnown RBP12.09□□□□□ -0.47
GPC1-208ENST00000469694 DDA1Q9BW61 102 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 SH3BGRL3Q9H299 93 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 CRLF2Q9HC73 371 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 B3GALT5Q9Y2C3 310 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 ZNF292O60281 2723 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 DOCK10Q96BY6 2186 aa12.09□□□□□ -0.47
GPC1-208ENST00000469694 SMCO3A2RU48 225 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 HSD17B6O14756 317 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 SOCS1O15524 211 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 ZIC3O60481 467 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 RFPL3SP0C7P2 107 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 LIFP15018 202 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 DLK1P80370 383 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 MFAP5Q13361 173 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.47
GPC1-208ENST00000469694 DCXRQ7Z4W1 244 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 SLC25A31Q9H0C2 315 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 SH2D2AQ9NP31 389 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 SIRT7Q9NRC8 400 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 CENPMQ9NSP4 180 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 BOD1L1Q8NFC6 3051 aa12.08□□□□□ -0.47
GPC1-208ENST00000469694 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 SDCBPO00560 298 aaPredicted RBP12.08□□□□□ -0.48
GPC1-208ENST00000469694 RAD51DO75771 328 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 KNG1P01042 644 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 IGHMP01871 453 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 HIST1H1DP16402 221 aaKnown RBP12.08□□□□□ -0.48
GPC1-208ENST00000469694 PTGER4P35408 488 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 RBMXP38159 391 aaKnown RBP12.08□□□□□ -0.48
GPC1-208ENST00000469694 GNALP38405 381 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 JOSD1Q15040 202 aaPredicted RBP12.08□□□□□ -0.48
GPC1-208ENST00000469694 TMEM164Q5U3C3 297 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 SPINK14Q6IE38 97 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 SLC22A25Q6T423 547 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 YRDCQ86U90 279 aaKnown RBP12.08□□□□□ -0.48
GPC1-208ENST00000469694 ZNF664Q8N3J9 261 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 PSMF1Q92530 271 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 THOC3Q96J01 351 aaKnown RBP12.08□□□□□ -0.48
GPC1-208ENST00000469694 KCNK17Q96T54 332 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 CCDC187A0A096LP49 1063 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 FGF7P21781 194 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 OR3A2P47893 321 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 TMEM50BP56557 158 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 GLO1Q04760 184 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 HAGHQ16775 308 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 OR14K1Q8NGZ2 314 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 ZPBPQ9BS86 351 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 DEPPQ9NTK1 212 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 DKKL1Q9UK85 242 aa12.08□□□□□ -0.48
GPC1-208ENST00000469694 SPENQ96T58 3664 aaKnown RBP12.07□□□□□ -0.48
GPC1-208ENST00000469694 SPAARA0A1B0GVQ0 90 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms