RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 RPS10P46783 165 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 CCL11P51671 97 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 Q3ZCU0 254 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 THEM4Q5T1C6 240 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 TMEM156Q8N614 296 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 SUMF2Q8NBJ7 301 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 SEMA6DQ8NFY4 1073 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 STT3BQ8TCJ2 826 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 DAZLQ92904 295 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 MRPL24Q96A35 216 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 NTNG2Q96CW9 530 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 SPACA5Q96QH8 159 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 GAL3ST4Q96RP7 486 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 WDR77Q9BQA1 342 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 MRPL13Q9BYD1 178 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 PARP12Q9H0J9 701 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 CHST11Q9NPF2 352 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 SIRT7Q9NRC8 400 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 DOK5Q9P104 306 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 SPTAN1Q13813 2472 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 C17orf51A8MQB3 221 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 H3BMH7 237 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 H7C1Q1 480 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 YIF1AO95070 293 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 PRH1P02810 166 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 HPNP05981 417 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 IL11P20809 199 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 BLVRBP30043 206 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 APOBEC1P41238 236 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 POU3F1Q03052 451 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 C9orf152Q5JTZ5 239 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 ABHD12BQ7Z5M8 362 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 WDFY1Q8IWB7 410 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 C9orf40Q8IXQ3 194 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 RBMXL3Q8N7X1 1067 aaKnown RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 ZNF610Q8N9Z0 462 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 ZNF383Q8NA42 475 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 FDCSPQ8NFU4 85 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 OR8B12Q8NGG6 310 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 AKR7LQ8NHP1 331 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 CPNE4Q96A23 557 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 SLAMF9Q96A28 289 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 GPER1Q99527 375 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 SPSB2Q99619 263 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 ZNF2Q9BSG1 426 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 HIPK2Q9H2X6 1198 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 PRDM13Q9H4Q3 707 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 GPR84Q9NQS5 396 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 GFOD1Q9NXC2 390 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 FBXO7Q9Y3I1 522 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 ICE1Q9Y2F5 2266 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 IGKV1-9A0A0C4DH69 117 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 A0A1W2PNV4 684 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 C9J4A7 227 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 ADAM10O14672 748 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 ST8SIA5O15466 376 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 TGOLN2O43493 480 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 IGHEP01854 428 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 CD63P08962 238 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 OR13C7P0DN81 318 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 CTSSP25774 331 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 FHITP49789 147 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 RBP2P50120 134 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 SUMO3P55854 103 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-205ENST00000469550 NDUFA6P56556 154 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 SOX8P57073 446 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 TMEM187Q14656 261 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 KCNMB1Q16558 191 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 IGFL3Q6UXB1 125 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 METTL27Q8N6F8 245 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-205ENST00000469550 ZNF441Q8N8Z8 693 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 APCDD1LQ8NCL9 501 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 OR2AJ1Q8NGZ0 328 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 OR14K1Q8NGZ2 314 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 MAFIPQ8WZ33 124 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 BSCL2Q96G97 398 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-205ENST00000469550 SUCNR1Q9BXA5 334 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 WWTR1Q9GZV5 400 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 LHFPL6Q9Y693 200 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 ESPL1Q14674 2120 aa8.32□□□□□ -1.08
HDAC3-205ENST00000469550 SPTBN1Q01082 2364 aaKnown RBP8.32□□□□□ -1.08
HDAC3-205ENST00000469550 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 RBFOX3A6NFN3 312 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 ANKUB1A6NFN9 424 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 KLF7O75840 302 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-205ENST00000469550 IGLV3-1P01715 115 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 ZNF43P17038 809 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 ZNF121P58317 390 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-205ENST00000469550 ELOBQ15370 118 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 KISS1Q15726 138 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 LBHQ53QV2 105 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-205ENST00000469550 SP5Q6BEB4 398 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-205ENST00000469550 RHBDD2Q6NTF9 364 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 CRIP3Q6Q6R5 217 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 REC114Q7Z4M0 266 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 TSLPQ969D9 159 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 C14orf144Q96I85 54 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 C18orf12Q96KH6 178 aa8.31□□□□□ -1.08
HDAC3-205ENST00000469550 NAA60Q9H7X0 242 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms