RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 FAM90A24PP0C7X0 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 SLC25A16P16260 332 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 DUSP1P28562 367 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 VEGFCP49767 419 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 ERVK11-1P61568 191 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 IL13RA1P78552 427 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 UNC119Q13432 240 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 ARL6IP1Q15041 203 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 ZMYND11Q15326 602 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TAF9Q16594 264 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM155Q4W5P6 130 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 PAN3Q58A45 887 aaKnown RBP6.81□□□□□ -1.32
HDAC6-216ENST00000468949 LRRC10Q5BKY1 277 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 NHLRC3Q5JS37 347 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM69Q5SWH9 247 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM201AQ5SY85 155 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TEX36Q5VZQ5 186 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 ASCL4Q6XD76 172 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 DCDC5Q6ZRR9 648 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 LRRC28Q86X40 367 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-216ENST00000468949 LYPD6Q86Y78 171 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TGIF2LYQ8IUE0 185 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 ZNF561Q8N587 486 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM104Q8NE00 496 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 OR5T2Q8NGG2 359 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 SLC25A28Q96A46 364 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 RAB39BQ96DA2 213 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 S100A16Q96FQ6 103 aaKnown RBP6.81□□□□□ -1.32
HDAC6-216ENST00000468949 MED30Q96HR3 178 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 Q96M66 194 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 BPESC1Q9GZL8 116 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 DNTTIP1Q9H147 329 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 MMP27Q9H306 513 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 ZNF665Q9H7R5 613 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 HES4Q9HCC6 221 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 PLEKHJ1Q9NW61 149 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 DCAF16Q9NXF7 216 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FBLN5Q9UBX5 448 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 MIOXQ9UGB7 285 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 PEX16Q9Y5Y5 336 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 A0A075B6Q4 140 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 A0A0A6YYH2 397 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 FUOMA2VDF0 154 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 A6NJ64 397 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 MCRIP1C9JLW8 97 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 F8VVB4 439 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 F8VWA3 439 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 NDUFB3O43676 98 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 HPGDSO60760 199 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 PDCD6O75340 191 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 CLPXO76031 633 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 OR2H2O95918 312 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 IGHV2-70P01814 119 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 APOA1P02647 267 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 PSG2P11465 335 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 NDUFB7P17568 137 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 GIFP27352 417 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 BLVRBP30043 206 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 PRDX2P32119 198 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 MNDAP41218 407 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 PRRC2AP48634 2157 aaKnown RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 CEBPDP49716 269 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 COL10A1Q03692 680 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 RBM39Q14498 530 aaKnown RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 ZNF146Q15072 292 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 ESCO2Q56NI9 601 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 SPANXN2Q5MJ10 180 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 SHEQ5VZ18 495 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 STUMQ69YW2 141 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 CRIP3Q6Q6R5 217 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 BAIAP2L2Q6UXY1 529 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 GDPD3Q7L5L3 318 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 LAX1Q8IWV1 398 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 OR5H6Q8NGV6 325 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 C10orf105Q8TEF2 133 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 ST8SIA4Q92187 359 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 RAB3CQ96E17 227 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 SEH1LQ96EE3 360 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 DIRAS2Q96HU8 199 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 C1orf147Q96MC9 270 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 CMTM3Q96MX0 182 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 CCL13Q99616 98 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 TM2D1Q9BX74 207 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 SLIRPQ9GZT3 109 aaKnown RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 CHMP1AQ9HD42 196 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 IL36RNQ9UBH0 155 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 EXTL2Q9UBQ6 330 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 A3GALT2U3KPV4 340 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 CELSR1Q9NYQ6 3014 aa6.8□□□□□ -1.32
HDAC6-216ENST00000468949 TEP1Q99973 2627 aaKnown RBP6.8□□□□□ -1.32
HDAC6-216ENST00000468949 IGKV1D-17A0A075B6S4 117 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 CEACAM18A8MTB9 384 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-216ENST00000468949 LDLRAD4O15165 306 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 SIGLEC5O15389 551 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 FSTL3O95633 263 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 CD3GP09693 182 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 CD37P11049 281 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 CD99P14209 185 aa6.79□□□□□ -1.32
HDAC6-216ENST00000468949 FUT3P21217 361 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms