RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RRP8O43159 456 aaKnown RBP2.87□□□□□ -1.95
LSM5-209ENST00000468872 ETHE1O95571 254 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 PTTG1O95997 202 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 PTHP01270 115 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 GCGP01275 180 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 IL1RNP18510 177 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 CXCR1P25024 350 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 APLNRP35414 380 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 ARL2P36404 184 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 NAB1Q13506 487 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 PIGHQ14442 188 aaPredicted RBP2.87□□□□□ -1.95
LSM5-209ENST00000468872 YIF1BQ5BJH7 314 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 OR13G1Q8NGZ3 307 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 GABRG3Q99928 467 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 EMC6Q9BV81 110 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 NUDT9Q9BW91 350 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 RSPO3Q9BXY4 272 aaPredicted RBP2.87□□□□□ -1.95
LSM5-209ENST00000468872 CHRNA10Q9GZZ6 450 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 OR51B5Q9H339 312 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 IFNKQ9P0W0 207 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 FARSAQ9Y285 508 aaKnown RBP2.87□□□□□ -1.95
LSM5-209ENST00000468872 NOSIPQ9Y314 301 aaKnown RBP2.87□□□□□ -1.95
LSM5-209ENST00000468872 PLXNA1Q9UIW2 1896 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 DOCK9Q9BZ29 2069 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 COL6A5A8TX70 2615 aa2.87□□□□□ -1.95
LSM5-209ENST00000468872 TICRRQ7Z2Z1 1910 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 IGHV3-49A0A0A0MS15 119 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 TRAV40A0A0B4J280 105 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 CCL15-CCL14A0A0B4J2E2 113 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 LOC100506127A0A0U1RQW1 187 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 M0R1X1 148 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 DFFAO00273 331 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 MANBAO00462 879 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 CHMP2AO43633 222 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 GMDSO60547 372 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 PLIN3O60664 434 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 RCBTB2O95199 551 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 IGLV2-8P01709 118 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 PCK1P35558 622 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 PRLHRP49683 370 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 INCA1Q0VD86 236 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 LY6EQ16553 131 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 CCL15Q16663 113 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 Q3ZCU0 254 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 HSP90AA4PQ58FG1 418 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 GUSBP11Q6P575 273 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 ARHGAP18Q8N392 663 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 OR9A2Q8NGT5 310 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 OR1L1Q8NH94 360 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 ENKURQ8TC29 256 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 DCAKDQ8WVC6 231 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 TMEM234Q8WY98 164 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 ZBED3Q96IU2 234 aaPredicted RBP2.86□□□□□ -1.95
LSM5-209ENST00000468872 LINC00477Q96M19 166 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 ARV1Q9H2C2 271 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 GAL3ST2Q9H3Q3 398 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 C21orf62Q9NYP8 219 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 CBY1Q9Y3M2 126 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 KLF12Q9Y4X4 402 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 ANKHD1Q8IWZ3 2542 aaKnown RBP2.86□□□□□ -1.95
LSM5-209ENST00000468872 MAP3K19Q56UN5 1328 aa2.86□□□□□ -1.95
LSM5-209ENST00000468872 UTP20O75691 2785 aaKnown RBP2.86□□□□□ -1.95
LSM5-209ENST00000468872 NUP214P35658 2090 aaPredicted RBP2.86□□□□□ -1.95
LSM5-209ENST00000468872 MAST2Q6P0Q8 1798 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 IGKV6-21A0A0C4DH24 114 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 PSPHP1O15172 72 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 UPK1BO75841 260 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 SMC2O95347 1197 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 PLEKHA8P1O95397 391 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 TTC4O95801 387 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 CCDC172P0C7W6 258 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 HOXB8P17481 243 aaPredicted RBP2.85□□□□□ -1.95
LSM5-209ENST00000468872 PTNP21246 168 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 PRKACBP22694 351 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 HCCSP53701 268 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 ZNF616Q08AN1 781 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 SLC25A25Q6KCM7 469 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 UNQ9165/PRO28630Q6UXU0 137 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 Q6ZSR6 202 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 HMGN2P46Q86SG4 172 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 CPNE4Q96A23 557 aaPredicted RBP2.85□□□□□ -1.95
LSM5-209ENST00000468872 SULT4A1Q9BR01 284 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 TMEM175Q9BSA9 504 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 CHCHD7Q9BUK0 85 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 SFXN3Q9BWM7 321 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 PLEKHF2Q9H8W4 249 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 HEBP1Q9NRV9 189 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 TMEM100Q9NV29 134 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 VAX2Q9UIW0 290 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 LRRC42Q9Y546 428 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 S4R3C0 116 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 RYR1P21817 5038 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 ADGRG4Q8IZF6 3080 aa2.85□□□□□ -1.95
LSM5-209ENST00000468872 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.95
LSM5-209ENST00000468872 CELSR1Q9NYQ6 3014 aa2.84□□□□□ -1.95
LSM5-209ENST00000468872 IGLV3-12A0A075B6K2 115 aa2.84□□□□□ -1.95
LSM5-209ENST00000468872 GOLGA8JA6NMD2 632 aa2.84□□□□□ -1.95
LSM5-209ENST00000468872 RPL36A-HNRNPH2H7BZ11 118 aa2.84□□□□□ -1.95
LSM5-209ENST00000468872 YKT6O15498 198 aa2.84□□□□□ -1.95
LSM5-209ENST00000468872 TRAPPC6AO75865 159 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms