RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 TMUB2Q71RG4 321 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 SSX8Q7RTT4 187 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ASCL5Q7RTU5 278 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF546Q86UE3 836 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 SLC51BQ86UW2 128 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 SLC38A6Q8IZM9 456 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 FAM185AQ8N0U4 392 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 GAPTQ8N292 157 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 KCNRGQ8N5I3 272 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 RBMXL3Q8N7X1 1067 aaKnown RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MOB3AQ96BX8 217 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MARS2Q96GW9 593 aaKnown RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 SYT3Q9BQG1 590 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF2Q9BSG1 426 aaPredicted RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 GSX2Q9BZM3 304 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 SEBOXQ9HB31 216 aaPredicted RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF701Q9NV72 531 aaPredicted RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MED9Q9NWA0 146 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 C1orf123Q9NWV4 160 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 UBQLN2Q9UHD9 624 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF230Q9UIE0 474 aaPredicted RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 TNFSF18Q9UNG2 199 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 PROCRQ9UNN8 238 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 OR5H1A6NKK0 313 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 NPIPB11E5RHQ5 1161 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 SDCBPO00560 298 aaPredicted RBP6.5□□□□□ -1.37
COL6A3-208ENST00000468792 KLK10O43240 276 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 RP2O75695 350 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 IFNA2P01563 188 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 GLRA1P23415 457 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 VAMP1P23763 118 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 PSMB6P28072 239 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 CEACAM8P31997 349 aaPredicted RBP6.5□□□□□ -1.37
COL6A3-208ENST00000468792 HTR2BP41595 481 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 GLP1RP43220 463 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 AP2S1P53680 142 aaPredicted RBP6.5□□□□□ -1.37
COL6A3-208ENST00000468792 RND3P61587 244 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 MZT1Q08AG7 82 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF146Q15072 292 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 SPIN3Q5JUX0 258 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 TIMM23BQ5SRD1 257 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 OR2T2Q6IF00 324 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 ACOT7LQ6ZUV0 252 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 SEM1Q6ZVN7 128 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 KCTD9Q7L273 389 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 MOB1BQ7L9L4 216 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 SGPP2Q8IWX5 399 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 GCNT2Q8N0V5 402 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 FAM58AQ8N1B3 248 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 CNEP1R1Q8N9A8 125 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 PPP1R1CQ8WVI7 109 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 EXTL1Q92935 676 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 PHYHIPLQ96FC7 376 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
COL6A3-208ENST00000468792 PDCD10Q9BUL8 212 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 RSRP1Q9BUV0 290 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 SFXN3Q9BWM7 321 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 SUCNR1Q9BXA5 334 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 MFFQ9GZY8 342 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 TLNRD1Q9H1K6 362 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF442Q9H7R0 627 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 Q9N2K0 584 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 ZFP57Q9NU63 452 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 CRIM1Q9NZV1 1036 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 KIF25Q9UIL4 384 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 KCNIP3Q9Y2W7 256 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 ATP23Q9Y6H3 246 aa6.5□□□□□ -1.37
COL6A3-208ENST00000468792 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
COL6A3-208ENST00000468792 RPS10-NUDT3A0A1W2PQS6 291 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 TRDCB7Z8K6 153 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 ARPC5O15511 151 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 TUSC2O75896 110 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 LYZL6O75951 148 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 WISP2O76076 250 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 PTBP3O95758 552 aaKnown RBP6.49□□□□□ -1.37
COL6A3-208ENST00000468792 PLATP00750 562 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 PET100P0DJ07 73 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 PGA5P0DJD9 388 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF728P0DKX0 622 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 CA6P23280 308 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 LMO1P25800 156 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 KCNJ3P48549 501 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 IDH3GP51553 393 aaPredicted RBP6.49□□□□□ -1.37
COL6A3-208ENST00000468792 RAB14P61106 215 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 SRPXP78539 464 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 SORDQ00796 357 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 PAX5Q02548 391 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 PSG7Q13046 419 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 EXOSC2Q13868 293 aaKnown RBP6.49□□□□□ -1.37
COL6A3-208ENST00000468792 SWI5Q1ZZU3 235 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 C4orf48Q5BLP8 95 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 C1orf185Q5T7R7 199 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 Q6P435 159 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 VWA1Q6PCB0 445 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 HAGHLQ6PII5 290 aaPredicted RBP6.49□□□□□ -1.37
COL6A3-208ENST00000468792 BHLHA15Q7RTS1 189 aaPredicted RBP6.49□□□□□ -1.37
COL6A3-208ENST00000468792 CCDC71LQ8N9Z2 235 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 OR8G5Q8NG78 346 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 OR5M9Q8NGP3 310 aa6.49□□□□□ -1.37
COL6A3-208ENST00000468792 THAP6Q8TBB0 222 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms