RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 DTX3Q8N9I9 347 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 PPP1R35Q8TAP8 253 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 C17orf50Q8WW18 174 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 GGHQ92820 318 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 FOXRED1Q96CU9 486 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-207ENST00000467985 TMEM80Q96HE8 168 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 PPA2Q9H2U2 334 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 RBFOX1Q9NWB1 397 aaKnown RBP15.51■□□□□ 0.07
COL7A1-207ENST00000467985 PSORS1C1Q9UIG5 152 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 PCDHGB5Q9Y5G0 923 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 TMEM82A0PJX8 343 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 TMEM212A6NML5 194 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 PRKACAP17612 351 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 BCL3P20749 454 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 DCKP27707 260 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 NPBWR2P48146 333 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 BMXP51813 675 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 ST3GAL4Q11206 333 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 GRK1Q15835 563 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 ZNF782Q6ZMW2 699 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-207ENST00000467985 SAXO1Q8IYX7 474 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 OR51A4Q8NGJ6 313 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 OR5D14Q8NGL3 314 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 OR13C9Q8NGT0 318 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 OR10AC1Q8NH08 325 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 ZNF714Q96N38 554 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 CCDC90BQ9GZT6 254 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 COMMD4Q9H0A8 199 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 HMG20AQ9NP66 347 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 MRPS18AQ9NVS2 196 aaKnown RBP15.5■□□□□ 0.07
COL7A1-207ENST00000467985 ERVK13-1Q9NX77 482 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 MYRFQ9Y2G1 1151 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 EXOSC1Q9Y3B2 195 aaKnown RBP15.5■□□□□ 0.07
COL7A1-207ENST00000467985 TBL2Q9Y4P3 447 aaKnown RBP15.5■□□□□ 0.07
COL7A1-207ENST00000467985 LINC00312Q9Y6C7 94 aa15.5■□□□□ 0.07
COL7A1-207ENST00000467985 DSCAML1Q8TD84 2053 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 FAM90A8PA6NJQ4 464 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 SH2D1BO14796 132 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 MGST3O14880 152 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 ALX3O95076 343 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 IGHV1-8P0DP01 117 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 GABRA5P31644 462 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 GBX2P52951 348 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-207ENST00000467985 EDDM3AQ14507 147 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 C11orf88Q6PI97 169 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 OR11H6Q8NGC7 330 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 OR4C13Q8NGP0 309 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 OR5AK2Q8NH90 309 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 YTHDF1Q9BYJ9 559 aaKnown RBP15.49■□□□□ 0.07
COL7A1-207ENST00000467985 ZCCHC4Q9H5U6 513 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 ISG20L2Q9H9L3 353 aaKnown RBP15.49■□□□□ 0.07
COL7A1-207ENST00000467985 TCF7L1Q9HCS4 588 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 FGF20Q9NP95 211 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-207ENST00000467985 IL36RNQ9UBH0 155 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 FBLN5Q9UBX5 448 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 DIMT1Q9UNQ2 313 aaKnown RBP15.49■□□□□ 0.07
COL7A1-207ENST00000467985 CMYA5Q8N3K9 4069 aa15.49■□□□□ 0.07
COL7A1-207ENST00000467985 VGLL3A8MV65 326 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 RGS10O43665 173 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 CRHBPP24387 322 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 ERP29P30040 261 aaKnown RBP15.48■□□□□ 0.07
COL7A1-207ENST00000467985 KRTAP10-3P60369 221 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 SLC35E4Q6ICL7 350 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 SERPINA12Q8IW75 414 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 MALSU1Q96EH3 234 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 RANBP3Q9H6Z4 567 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-207ENST00000467985 EXOSC4Q9NPD3 245 aaKnown RBP15.48■□□□□ 0.07
COL7A1-207ENST00000467985 WNK1Q9H4A3 2382 aa15.48■□□□□ 0.07
COL7A1-207ENST00000467985 FUOMA2VDF0 154 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 ODF3BA8MYP8 253 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 MYL12BO14950 172 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 PSPNO60542 156 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 KDM4BO94953 1096 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 ZFPL1O95159 310 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 ARG1P05089 322 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 CDK1P06493 297 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 DUSP1P28562 367 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 GABARAPL2P60520 117 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 LY6EQ16553 131 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 ZNF626Q68DY1 528 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 TMPRSS11AQ6ZMR5 421 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 PARP16Q8N5Y8 322 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 OR52N4Q8NGI2 321 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 RFT1Q96AA3 541 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 CPNE2Q96FN4 548 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-207ENST00000467985 ZNF649Q9BS31 505 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 JAM3Q9BX67 310 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 CDCA4Q9BXL8 241 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 CHST6Q9GZX3 395 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 DHDHQ9UQ10 334 aa15.47■□□□□ 0.07
COL7A1-207ENST00000467985 UBE2J1Q9Y385 318 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-207ENST00000467985 SULT1B1O43704 296 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 TNFAIP8O95379 198 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 HCKP08631 526 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 KIR2DS4P43632 304 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 OR3A1P47881 315 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 P2RX3P56373 397 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 SLC35A2P78381 396 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 ASPHD2Q6ICH7 369 aa15.46■□□□□ 0.07
COL7A1-207ENST00000467985 CRIP3Q6Q6R5 217 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms