RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 WDR13Q9H1Z4 485 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 C5orf66Q9H5L9 145 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 RERGLQ9H628 205 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 SEC61A2Q9H9S3 476 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 PLXNA1Q9UIW2 1896 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 PLXNB2O15031 1838 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 FXYD6-FXYD2A0A087WZ82 144 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 IRGMA1A4Y4 181 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 A8MWP6 167 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 TBL1XO60907 577 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 LRATO95237 230 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 LOXP28300 417 aaPredicted RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 S100A3P33764 101 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 XCR1P46094 333 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 FOXG1P55316 489 aaPredicted RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 CKS1BP61024 79 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 RAB40BQ12829 278 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 CSRP2Q16527 193 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 OLFML2AQ68BL7 652 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 SAMD12Q8N8I0 201 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 OR6N1Q8NGY5 312 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 ADAMTS17Q8TE56 1095 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 CCDC107Q8WV48 283 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 EEF1AKMT1Q8WVE0 214 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 TNFAIP8L1Q8WVP5 186 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 SSBP4Q9BWG4 385 aaPredicted RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 VN1R1Q9GZP7 353 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 FXYD6Q9H0Q3 95 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 RETNQ9HD89 108 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 RCL1Q9Y2P8 373 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 EXOSC1Q9Y3B2 195 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 COL4A4P53420 1690 aaPredicted RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 A0A0G2JK05 382 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 ARG1P05089 322 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 CD2P06729 351 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 BCKDHAP12694 445 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 RAB5AP20339 215 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 MAGEA5P43359 124 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 HSF1Q00613 529 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 PNRC1Q12796 327 aaPredicted RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 FOXC1Q12948 553 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 ELOA3BQ3SY89 546 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 NCMAPQ5T1S8 102 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 IL34Q6ZMJ4 242 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 STPG3Q8N7X2 389 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 LINC01356Q8N9X3 169 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 PNLDC1Q8NA58 520 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 ELOA3Q8NG57 546 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 OR51S1Q8NGJ8 323 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 OR5R1Q8NH85 324 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 SSMEM1Q8WWF3 244 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 TAAR8Q969N4 342 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 NRIP2Q9BQI9 281 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 TBL1XR1Q9BZK7 514 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 NXF5Q9H1B4 397 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 MMP26Q9NRE1 261 aa6.61□□□□□ -1.35
SPTBN1-204ENST00000467371 TRAV14DV4A0A0A6YYC5 116 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 OR5H14A6NHG9 310 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 SRRM4A7MD48 611 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 F5H5P2 479 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 J3QR06 171 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ERI3O43414 337 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 BCL2L11O43521 198 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 GLI4P10075 376 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 RPL13AP40429 203 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 AKR1C2P52895 323 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 AKR1C1Q04828 323 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ZNF672Q499Z4 452 aaPredicted RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 KIAA0895LQ68EN5 471 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 CMTM7Q96FZ5 175 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 PILRAQ9UKJ1 303 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 PDE6DO43924 150 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ZG16O60844 167 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ACP2P11117 423 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 DUSP1P28562 367 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 TMPRSS3P57727 454 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 TBPL1P62380 186 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ARHGAP11BQ3KRB8 267 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 SLC25A48Q6ZT89 311 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ARL11Q969Q4 196 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ZNF649Q9BS31 505 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 NOX3Q9HBY0 568 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 TAS2R13Q9NYV9 303 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 A0A1B0GU03 582 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 FAM157AC9JC47 383 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 HKR1P10072 659 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 AK4P27144 223 aaPredicted RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ITPKBP27987 946 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 RPS14P62263 151 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 SLC35B1P78383 322 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 SRSF4Q08170 494 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 SNAI3Q3KNW1 292 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 VWA2Q5GFL6 755 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 RFLNAQ6ZTI6 216 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 ANKRD37Q7Z713 158 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 RNF175Q8N4F7 328 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 KIR3DL3Q8N743 410 aa6.6□□□□□ -1.35
SPTBN1-204ENST00000467371 OR1J4Q8NGS1 313 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms