RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PMVKQ15126 192 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 TGIF1Q15583 401 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 BATFQ16520 125 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 WHAMMP3Q1A5X7 153 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 LRRC36Q1X8D7 754 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 TIMM50Q3ZCQ8 353 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 PRR30Q53SZ7 412 aaPredicted RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 RSBN1Q5VWQ0 802 aaPredicted RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 H2AFVQ71UI9 128 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 DHFR2Q86XF0 187 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 C11orf42Q8N5U0 333 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 OR13G1Q8NGZ3 307 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 OR9G1Q8NH87 305 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 OR13C6PQ8NH95 151 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 MCFD2Q8NI22 146 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 RNASE11Q8TAA1 199 aaKnown RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 SLC37A2Q8TED4 501 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 SKA2Q8WVK7 121 aaPredicted RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 TNFAIP8L1Q8WVP5 186 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 CHCHD10Q8WYQ3 142 aaPredicted RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 IL22RA2Q969J5 263 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 MARC2Q969Z3 335 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 HAUS1Q96CS2 278 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 BIRC8Q96P09 236 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 OLFM3Q96PB7 478 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 QKIQ96PU8 341 aaKnown RBP eCLIP2.75□□□□□ -1.97
VPS50-209ENST00000467326 METTL26Q96S19 204 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 RNF126Q9BV68 326 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 SLIRPQ9GZT3 109 aaKnown RBP2.75□□□□□ -1.97
VPS50-209ENST00000467326 ENY2Q9NPA8 101 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 MIEF1Q9NQG6 463 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 FAM49BQ9NUQ9 324 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 DMAC2Q9NW81 257 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 ZNF446Q9NWS9 450 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 DHRS4-AS1Q9P1J3 65 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 OPTCQ9UBM4 332 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 DKKL1Q9UK85 242 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 CELA1Q9UNI1 258 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 HSPB11Q9Y547 144 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 OR51B4Q9Y5P0 310 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 KIF25-AS1Q9Y6Z4 181 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 CAMSAP1Q5T5Y3 1602 aa2.75□□□□□ -1.97
VPS50-209ENST00000467326 ERCC6Q03468 1493 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 IGHV7-81A0A0B4J1V7 117 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 TRAV8-2A0A0B4J237 113 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 IGKV1D-13A0A0B4J2D9 117 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 TEX50A0A1B0GTY4 177 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 ZNF878C9JN71 531 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 UPK2O00526 184 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 BET1O15155 118 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 OR7C1O76099 320 aaPredicted RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 ATG12O94817 140 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 CSF3P09919 207 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 OR8U8P0C7N1 319 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 IGKV1-13P0DP09 117 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 IGLL1P15814 213 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 S100GP29377 79 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 AGTR1P30556 359 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 GGT2P36268 569 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 SRP9P49458 86 aaKnown RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 RAB5BP61020 215 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 NAA20P61599 178 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 RPS23P62266 143 aaKnown RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 RSU1Q15404 277 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 SNRNP35Q16560 246 aaKnown RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 C17orf58Q2M2W7 97 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 CEACAM16Q2WEN9 425 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 TRMT12Q53H54 448 aaKnown RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 STEAP4Q687X5 459 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 OR10K2Q6IF99 312 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 UNQ9370/PRO34162Q6UXP9 181 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 TEX43Q6ZNM6 134 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 FAM220AQ7Z4H9 259 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 SLC22A18ASQ8N1D0 253 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 C6orf223Q8N319 242 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 STX19Q8N4C7 294 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 NPWQ8N729 165 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 UBL4BQ8N7F7 174 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 ARIH2OSQ8N7S6 290 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 SLC35G3Q8N808 338 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 ZFP41Q8N8Y5 198 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 OR2Z1Q8NG97 314 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 OR11H7Q8NGC8 314 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 OR1L8Q8NGR8 309 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 OR52N1Q8NH53 320 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 ZNF420Q8TAQ5 688 aaPredicted RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 RGP1Q92546 391 aaPredicted RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 TMBIM1Q969X1 311 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 BORCS7Q96B45 105 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 CPNE2Q96FN4 548 aaPredicted RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 ANKRD36BP1Q96IX9 119 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 EMC6Q9BV81 110 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 MROQ9BYG7 248 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 YTHDF1Q9BYJ9 559 aaKnown RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 METTL17Q9H7H0 456 aaPredicted RBP2.74□□□□□ -1.97
VPS50-209ENST00000467326 VSIRQ9H7M9 311 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 VAX2Q9UIW0 290 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 ZNF225Q9UK10 706 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 VPREB3Q9UKI3 123 aa2.74□□□□□ -1.97
VPS50-209ENST00000467326 UBIAD1Q9Y5Z9 338 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms