RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 IFNA7P01567 189 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 CRHP06850 196 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 S100A11P31949 105 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 P2RY6Q15077 328 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 SLC9A3R2Q15599 337 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 IGFBP7Q16270 282 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 ELP2Q6IA86 826 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 PRR13Q9NZ81 148 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 HLA-GP17693 338 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 DTYMKP23919 212 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 PTGER4P35408 488 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 HAGHLQ6PII5 290 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-205ENST00000466192 CLEC18BQ6UXF7 455 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 BEND4Q6ZU67 534 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 TMUB2Q71RG4 321 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 C17orf78Q8N4C9 275 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 Q8NA96 180 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 OR1J1Q8NGS3 322 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 ARL6Q9H0F7 186 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 ZNF442Q9H7R0 627 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 OR5B21A6NL26 309 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 SNAPC5O75971 98 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 ZNF205O95201 554 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 KNG1P01042 644 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 PGAM2P15259 253 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 FUT3P21217 361 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 GNG3P63215 75 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 SUPT4H1P63272 117 aaKnown RBP15.6■□□□□ 0.09
COL9A3-205ENST00000466192 ALKBH6Q3KRA9 238 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 BHLHA15Q7RTS1 189 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-205ENST00000466192 FAM57AQ8TBR7 257 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 PPP1R1CQ8WVI7 109 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 UBQLN2Q9UHD9 624 aa15.6■□□□□ 0.09
COL9A3-205ENST00000466192 DBX1A6NMT0 343 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 EEF1E1-BLOC1S5C9J1V9 151 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 RRP8O43159 456 aaKnown RBP15.59■□□□□ 0.09
COL9A3-205ENST00000466192 CECR9P0C854 216 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 OR5H8P0DN80 308 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 TIMP3P35625 211 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 FGF12P61328 243 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 SRSF4Q08170 494 aaKnown RBP15.59■□□□□ 0.09
COL9A3-205ENST00000466192 FGL1Q08830 312 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 MKXQ8IYA7 352 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 MFFQ9GZY8 342 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 COMMD9Q9P000 198 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 IL36RNQ9UBH0 155 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 C13orf42A0A1B0GVH6 325 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 SFT2D2O95562 160 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 RAC2P15153 192 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 ZNF474Q6S9Z5 364 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-205ENST00000466192 ZNF546Q86UE3 836 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 PCNPQ8WW12 178 aaKnown RBP15.59■□□□□ 0.09
COL9A3-205ENST00000466192 LIME1Q9H400 295 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 MAB21L2Q9Y586 359 aa15.59■□□□□ 0.09
COL9A3-205ENST00000466192 C5orf51A6NDU8 294 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 OR5H1A6NKK0 313 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 TRAPPC2LH3BP13 241 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 BET1O15155 118 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 IGLV1-44P01699 117 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 TDGF1P3P51864 188 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 PSG7Q13046 419 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 ZNF573Q86YE8 665 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 CISD2Q8N5K1 135 aaKnown RBP15.58■□□□□ 0.08
COL9A3-205ENST00000466192 MARS2Q96GW9 593 aaKnown RBP15.58■□□□□ 0.08
COL9A3-205ENST00000466192 POM121Q96HA1 1249 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 ZNF488Q96MN9 340 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 OR51I2Q9H344 312 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 NECAP2Q9NVZ3 263 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 SHANK1Q9Y566 2161 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 SCO1O75880 301 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 SERPINF1P36955 418 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 MPV17P39210 176 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 EIF2S3LQ2VIR3 472 aaKnown RBP15.58■□□□□ 0.08
COL9A3-205ENST00000466192 NHLRC3Q5JS37 347 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 PXDC1Q5TGL8 231 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 ZNF660Q6AZW8 331 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-205ENST00000466192 SLC22A25Q6T423 547 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 KLF14Q8TD94 323 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-205ENST00000466192 AIFM2Q9BRQ8 373 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 OBP2BQ9NPH6 170 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 C12orf4Q9NQ89 552 aa15.58■□□□□ 0.08
COL9A3-205ENST00000466192 C14orf166Q9Y224 244 aaKnown RBP15.58■□□□□ 0.08
COL9A3-205ENST00000466192 IGF2RP11717 2491 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A10PA6NDY2 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A18PA6NE21 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A16PA6NEW6 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A20PA6NIJ5 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A8PA6NJQ4 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A7PA6NKC0 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A22PA8MWA6 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A12PA8MX19 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A5PA8MXJ8 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A23PA8MXZ1 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 RP2O75695 350 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A15PP0C7V4 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A13PP0C7W8 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A14PP0C7W9 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 FAM90A24PP0C7X0 464 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 RPA2P15927 270 aa15.57■□□□□ 0.08
COL9A3-205ENST00000466192 SURF2Q15527 256 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms