RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 FHL3Q13643 280 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
HDAC6-214ENST00000465269 GINS1Q14691 196 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 ZIK1Q3SY52 487 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-214ENST00000465269 TEX30Q5JUR7 227 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 TEX38Q6PEX7 206 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
HDAC6-214ENST00000465269 IQCF1Q8N6M8 205 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 OR11H1Q8NG94 326 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 OR5A2Q8NGI9 324 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 OR56B4Q8NH76 319 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 TEX47Q8TBZ9 253 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 DNAJC9Q8WXX5 260 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 MED20Q9H944 212 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 ZNF286AQ9HBT8 521 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 RETNQ9HD89 108 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 OR5B21A6NL26 309 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 H3BSH0 61 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 J3QT63 122 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 PSMD9O00233 223 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 IGHA1P01876 353 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 ALPLP05186 524 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 PEX2P28328 305 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 EPHA2P29317 976 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 CDX1P47902 265 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-214ENST00000465269 ALDH3A2P51648 485 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 HAPLN4Q86UW8 402 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 ANGPTL5Q86XS5 388 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 COMMD1Q8N668 190 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 DRAM1Q8N682 238 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 OR52N4Q8NGI2 321 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 OR5B12Q96R08 314 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 RIBC2Q9H4K1 309 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 HES4Q9HCC6 221 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 IL36RNQ9UBH0 155 aa11.64□□□□□ -0.55
HDAC6-214ENST00000465269 hADV38S2A0JD32 116 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 LY6LH3BQJ8 138 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 ATP6V1G2O95670 118 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 IGHG2P01859 326 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 APOC1P02654 83 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 CDK2P24941 298 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 CDK5Q00535 292 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 MEF2CQ06413 473 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-214ENST00000465269 RIPK1Q13546 671 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 GPR50Q13585 617 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 HES1Q14469 280 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 PTGES3Q15185 160 aaKnown RBP11.63□□□□□ -0.55
HDAC6-214ENST00000465269 PNLIPRP3Q17RR3 467 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 CXorf66Q5JRM2 361 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-214ENST00000465269 TRAPPC6BQ86SZ2 158 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 OR8H2Q8N162 312 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 OR2T33Q8NG76 320 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 LINC00476Q8WZB0 136 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 NMNAT2Q9BZQ4 307 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 GPR173Q9NS66 373 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 KLHDC2Q9Y2U9 406 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 ORC6Q9Y5N6 252 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 LINC00312Q9Y6C7 94 aa11.63□□□□□ -0.55
HDAC6-214ENST00000465269 A6NIN4 97 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 CCRL2O00421 344 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 CASQ2O14958 399 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-214ENST00000465269 NOS1APO75052 506 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-214ENST00000465269 SAP30O75446 220 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 LY6G6CO95867 125 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 FAM106CPP0CH98 169 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 MAP2K3P46734 347 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 POU3F4P49335 361 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 ARHGDIBP52566 201 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 ESRRGP62508 458 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 DIAPH2-AS1Q14236 149 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 CATSPERDQ86XM0 798 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 FOXRED2Q8IWF2 684 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 NRG4Q8WWG1 115 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 DCUN1D4Q92564 292 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 FAM110AQ9BQ89 295 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 GNB4Q9HAV0 340 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 BAIAP2Q9UQB8 552 aa11.62□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A18PA6NE21 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A16PA6NEW6 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A20PA6NIJ5 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A9PA6NNJ1 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A12PA8MX19 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A5PA8MXJ8 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 IGHV3-7P01780 117 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A15PP0C7V4 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A13PP0C7W8 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A14PP0C7W9 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 FAM90A24PP0C7X0 464 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 TMEM11P17152 192 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 DUSP1P28562 367 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 INSL3P51460 131 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 ERVK11-1P61568 191 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 GRK1Q15835 563 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 HLA-DRB5Q30154 266 aa11.61□□□□□ -0.55
HDAC6-214ENST00000465269 OGFRL1Q5TC84 451 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-214ENST00000465269 COMMD2Q86X83 199 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms