RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CYSRT1A8MQ03 144 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 A8MXE2 369 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 KRBOX1C9JBD0 128 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 FARS2O95363 451 aaKnown RBP8.52□□□□□ -1.05
PTPRD-207ENST00000463477 FGF2P09038 288 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 COX5BP10606 129 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 COX6B1P14854 86 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 VAMP1P23763 118 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 KIR2DL2P43627 348 aaPredicted RBP8.52□□□□□ -1.05
PTPRD-207ENST00000463477 HTR5AP47898 357 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 RBP2P50120 134 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 ASCL1P50553 236 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 ATP1B3P54709 279 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 MTCP1P56278 107 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 HGFACQ04756 655 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 GUSBP1Q15486 140 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 CEACAM16Q2WEN9 425 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 COLCA1Q6ZS62 124 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
PTPRD-207ENST00000463477 GCNT2Q8N0V5 402 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 CSNK2A3Q8NEV1 391 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 OR5D18Q8NGL1 313 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 ROBO4Q8WZ75 1007 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 PIGTQ969N2 578 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 STARD4Q96DR4 205 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 RTBDNQ9BSG5 229 aaPredicted RBP8.52□□□□□ -1.05
PTPRD-207ENST00000463477 C1QTNF5Q9BXJ0 243 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 PRRG4Q9BZD6 226 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 PIGMQ9H3S5 423 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 CHMP1AQ9HD42 196 aaPredicted RBP8.52□□□□□ -1.05
PTPRD-207ENST00000463477 PARPBPQ9NWS1 579 aa8.52□□□□□ -1.05
PTPRD-207ENST00000463477 HCFC1P51610 2035 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 LOC100509620A0A075B734 347 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 CCSO14618 274 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 MSTNO14793 375 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 SYNGR4O95473 234 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 NRASP01111 189 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 LCATP04180 440 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 B4GALT1P15291 398 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF250P15622 560 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 RPS2P15880 293 aaKnown RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 FUT6P51993 359 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 ARPC4P59998 168 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 SUPT4H1P63272 117 aaKnown RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 FAM3AP98173 230 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 NAAAQ02083 359 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 CHRFAM7AQ494W8 412 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 MEX3BQ6ZN04 569 aaKnown RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 MOB3CQ70IA8 216 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 FAM214BQ7L5A3 538 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 ZSCAN4Q8NAM6 433 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 INO80EQ8NBZ0 244 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 OR1S1Q8NH92 325 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 STOML3Q8TAV4 291 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 NPRL2Q8WTW4 380 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 C17orf50Q8WW18 174 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 RNASE6Q93091 150 aaKnown RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 GMPPAQ96IJ6 420 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 ALKBH3Q96Q83 286 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 VRK1Q99986 396 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 GPR173Q9NS66 373 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 EHFQ9NZC4 300 aa8.51□□□□□ -1.05
PTPRD-207ENST00000463477 ANKHD1Q8IWZ3 2542 aaKnown RBP8.51□□□□□ -1.05
PTPRD-207ENST00000463477 ABCA12Q86UK0 2595 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 TEX13DA0A0J9YY54 714 aaPredicted RBP8.5□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF816-ZNF321PA0A0X1KG74 233 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF724A8MTY0 619 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 F8VVB4 439 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 F8VWA3 439 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 TPD52L2O43399 206 aaKnown RBP8.5□□□□□ -1.05
PTPRD-207ENST00000463477 CGAP01215 116 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 CSTBP04080 98 aaKnown RBP8.5□□□□□ -1.05
PTPRD-207ENST00000463477 RLN2P04090 185 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 SERPINA5P05154 406 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 TMEM225BP0DP42 221 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 CHATP28329 748 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 SERPINF1P36955 418 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 NPY4RP50391 375 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 RSU1Q15404 277 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 KCTD9Q7L273 389 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 SKA3Q8IX90 412 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF295-AS1Q8N0V1 137 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 Q8NFD4 153 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 OR10K1Q8NGX5 313 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 AKR7LQ8NHP1 331 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 SUN5Q8TC36 379 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 CASTOR1Q8WTX7 329 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 PCNPQ8WW12 178 aaKnown RBP8.5□□□□□ -1.05
PTPRD-207ENST00000463477 C14orf79Q96F83 325 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 BORCS8Q96FH0 119 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 SEC22AQ96IW7 307 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 CXorf58Q96LI9 332 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 ARPC5LQ9BPX5 153 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 GP6Q9HCN6 339 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 PLSCR4Q9NRQ2 329 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 PLEKHJ1Q9NW61 149 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 SLC7A11Q9UPY5 501 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 FREM1Q5H8C1 2179 aa8.5□□□□□ -1.05
PTPRD-207ENST00000463477 IGKV1-27A0A075B6S5 117 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 C5orf51A6NDU8 294 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms