RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 METTL21EPA6NDL7 271 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A10PA6NDY2 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A18PA6NE21 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A16PA6NEW6 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A20PA6NIJ5 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A8PA6NJQ4 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A7PA6NKC0 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 TRIM64CA6NLI5 447 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 NOTOA8MTQ0 251 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A22PA8MWA6 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A12PA8MX19 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A5PA8MXJ8 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A23PA8MXZ1 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 MCRIP1C9JLW8 97 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 K7N7A8 449 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 SIRPB1O00241 398 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 MPIG6BO95866 241 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 OR2H2O95918 312 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 IGKV1D-12P01611 117 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 TK1P04183 234 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 SFTPBP07988 381 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A15PP0C7V4 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A13PP0C7W8 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A14PP0C7W9 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM90A24PP0C7X0 464 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 PPIAL4GP0DN37 164 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 CALCBP10092 127 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 MGMTP16455 207 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 GADD45AP24522 165 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 DUSP1P28562 367 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 RBM11P57052 281 aaKnown RBP5.3□□□□□ -1.56
SF3B1-206ENST00000462613 SEC61A1P61619 476 aaKnown RBP5.3□□□□□ -1.56
SF3B1-206ENST00000462613 RPL31P62899 125 aaKnown RBP5.3□□□□□ -1.56
SF3B1-206ENST00000462613 MRPS15P82914 257 aaKnown RBP5.3□□□□□ -1.56
SF3B1-206ENST00000462613 HNRNPA0Q13151 305 aaKnown RBP5.3□□□□□ -1.56
SF3B1-206ENST00000462613 EDDM3AQ14507 147 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 CR1LQ2VPA4 569 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 PAN3Q58A45 887 aaKnown RBP5.3□□□□□ -1.56
SF3B1-206ENST00000462613 NHLRC3Q5JS37 347 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 C1orf100Q5SVJ3 147 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 ASPHD2Q6ICH7 369 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 ASCL4Q6XD76 172 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 OR2W3Q7Z3T1 314 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 TRAPPC6BQ86SZ2 158 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 LRRTM1Q86UE6 522 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM185AQ8N0U4 392 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 Q8NFD4 153 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 OR4D6Q8NGJ1 314 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 OR51T1Q8NGJ9 327 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 NANPQ8TBE9 248 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 FAM46BQ96A09 425 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 NEDD4LQ96PU5 975 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 SMR3AQ99954 134 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 DCTN5Q9BTE1 182 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 SELENOIQ9C0D9 397 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 OR51E2Q9H255 320 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 ONECUT1Q9UBC0 465 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 STEAP1Q9UHE8 339 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 RPUSD1Q9UJJ7 312 aaKnown RBP5.3□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF222Q9UK12 451 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 MAB21L2Q9Y586 359 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 INSIG2Q9Y5U4 225 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 HIVEP1P15822 2718 aa5.3□□□□□ -1.56
SF3B1-206ENST00000462613 TRGV10A0A0A0MS01 117 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 KIR2DS1A0A191URI9 304 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 IFITM5A6NNB3 132 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 KIAA1324LA8MWY0 1029 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 F8VVB4 439 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 F8VWA3 439 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 AIPO00170 330 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 TNFRSF13BO14836 293 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 SLC22A1O15245 554 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 CA11O75493 328 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 SCGNO76038 276 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 TOX4O94842 621 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 CSN2P05814 226 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 SRD5A1P18405 259 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 ADRA2CP18825 462 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 LMO1P25800 156 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 ERP29P30040 261 aaKnown RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 SDC2P34741 201 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 RBMXP38159 391 aaKnown RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 RPL5P46777 297 aaKnown RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 CEBPDP49716 269 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 SCAND1P57086 179 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 HOXA4Q00056 320 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 GUCA2AQ02747 115 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 MXD1Q05195 221 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 MEF2CQ06413 473 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-206ENST00000462613 ARL6IP1Q15041 203 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 PDCD1Q15116 288 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 TAF9Q16594 264 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 PIGYQ3MUY2 71 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 KRBOX4Q5JUW0 171 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 FAM120AOSQ5T036 256 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 HES5Q5TA89 166 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 GPR157Q5UAW9 335 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 NCR3LG1Q68D85 454 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 ZNF841Q6ZN19 808 aa5.29□□□□□ -1.56
SF3B1-206ENST00000462613 Q71RC1 249 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms