RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 YLPM1P49750 1951 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-212ENST00000461239 CUBNO60494 3623 aa6.67□□□□□ -1.34
ECHDC1-212ENST00000461239 SETD2Q9BYW2 2564 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 OR4C45A6NMZ5 311 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 ZNF850A8MQ14 1090 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 TMEM178BH3BS89 294 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 M0QZ24 198 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 SLC1A7O00341 560 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 HSPA12AO43301 675 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 GMDSO60547 372 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 ERCC1P07992 297 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 SLC25A16P16260 332 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 CFL1P23528 166 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 DCKP27707 260 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 DDOSTP39656 456 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 VHLP40337 213 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 TMEM33P57088 247 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 LMO4P61968 165 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 ST3GAL4Q11206 333 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 OR8G1Q15617 311 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 FAM76BQ5HYJ3 339 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 FAM201AQ5SY85 155 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 AVPI1Q5T686 147 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 BCL2L15Q5TBC7 163 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 TMEM42Q69YG0 159 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 SYS1Q8N2H4 156 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 Q8NFD4 153 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 BPIFB6Q8NFQ5 453 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 OR51A4Q8NGJ6 313 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 RPS4Y2Q8TD47 263 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 OR5P3Q8WZ94 311 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 TMEM80Q96HE8 168 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 ADAT1Q9BUB4 502 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 MOB1AQ9H8S9 216 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 SEBOXQ9HB31 216 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 TMEM106BQ9NUM4 274 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 UBAP1Q9NZ09 502 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 CNOT2Q9NZN8 540 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 ZNF391Q9UJN7 358 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 WIPI2Q9Y4P8 454 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 ABCA1O95477 2261 aa6.66□□□□□ -1.34
ECHDC1-212ENST00000461239 DYSFO75923 2080 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 FN1P02751 2386 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 EFCAB10A6NFE3 127 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 ANKRD30BLA7E2S9 258 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 PPIHO43447 177 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 DHRS3O75911 302 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 LY6G6DO95868 133 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 CYB5R3P00387 301 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 IGHV2-70P01814 119 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 HTR1AP08908 422 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 IGHV4-31P0DP07 118 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 ATP6V1B1P15313 513 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 USF1P22415 310 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 CPT2P23786 658 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 GPR6P46095 362 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 CSNK2BP67870 215 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 SLC35A2P78381 396 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 PRDX4Q13162 271 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 TMEM249Q2WGJ8 235 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 ZNF826PQ6ZT77 177 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 AHSA2Q719I0 299 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 EGFL6Q8IUX8 553 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 CSNK2A3Q8NEV1 391 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 OR1M1Q8NGA1 313 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 CLDND2Q8NHS1 167 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 PIGCQ92535 297 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 RGP1Q92546 391 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 GRAMD2BQ96HH9 432 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 PDCD1LG2Q9BQ51 273 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 PAPOLGQ9BWT3 736 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 EGLN1Q9GZT9 426 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 SLC22A4Q9H015 551 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 TLNRD1Q9H1K6 362 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 NARFLQ9H6Q4 476 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 METTL17Q9H7H0 456 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 UFSP2Q9NUQ7 469 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 RAB26Q9ULW5 256 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 PPP1R3CQ9UQK1 317 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 PIGLQ9Y2B2 252 aa6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 CAB39Q9Y376 341 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-212ENST00000461239 MXRA5Q9NR99 2828 aa6.65□□□□□ -1.35
ECHDC1-212ENST00000461239 SONP18583 2426 aaKnown RBP6.65□□□□□ -1.35
ECHDC1-212ENST00000461239 IGKV1-9A0A0C4DH69 117 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 IGLV5-39A0A0G2JS06 123 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ZNF816-ZNF321PA0A0X1KG74 233 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 LOC107986453A0A1B0GWG9 222 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 TNFRSF13BO14836 293 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 FCN3O75636 299 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 LHBP01229 141 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ISG15P05161 165 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 CDK1P06493 297 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 CRHBPP24387 322 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 TGM4P49221 684 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 SRP9P49458 86 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ACTA2P62736 377 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 ACTG2P63267 376 aa6.64□□□□□ -1.35
ECHDC1-212ENST00000461239 RIPPLY1Q0D2K3 151 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms