RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 FDX2Q6P4F2 183 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 COMMD2Q86X83 199 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 CATSPERDQ86XM0 798 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 CCDC54Q8NEL0 328 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 NARS2Q96I59 477 aaKnown RBP9.38□□□□□ -0.91
APTX-209ENST00000460940 MEGF10Q96KG7 1140 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 LYZL4Q96KX0 146 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 OR2V2Q96R30 315 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 GPR84Q9NQS5 396 aa9.38□□□□□ -0.91
APTX-209ENST00000460940 DHRS7CA6NNS2 312 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 SULT1C2O00338 296 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 GABRPO00591 440 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 DHRS3O75911 302 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 CST4P01036 141 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 RLN2P04090 185 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 S100A9P06702 114 aaKnown RBP9.37□□□□□ -0.91
APTX-209ENST00000460940 ACAA1P09110 424 aaPredicted RBP9.37□□□□□ -0.91
APTX-209ENST00000460940 UBCP0CG48 685 aaKnown RBP9.37□□□□□ -0.91
APTX-209ENST00000460940 CCL1P22362 96 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 CA6P23280 308 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 GNALP38405 381 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 GATA4P43694 442 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 LOXL1Q08397 574 aaPredicted RBP9.37□□□□□ -0.91
APTX-209ENST00000460940 DHRS7BQ6IAN0 325 aaPredicted RBP9.37□□□□□ -0.91
APTX-209ENST00000460940 UQCC3Q6UW78 93 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 C16orf54Q6UWD8 224 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 BAIAP2L2Q6UXY1 529 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 TOMM5Q8N4H5 51 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 C12orf45Q8N5I9 185 aaPredicted RBP9.37□□□□□ -0.91
APTX-209ENST00000460940 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 ZNF485Q8NCK3 441 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 NANPQ8TBE9 248 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 OR51E1Q8TCB6 317 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 ITLN1Q8WWA0 313 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 ERGIC1Q969X5 290 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 C4orf36Q96KX1 117 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 TCEAL7Q9BRU2 100 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 PIPOXQ9P0Z9 390 aa9.37□□□□□ -0.91
APTX-209ENST00000460940 A0A096LNT2 108 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 F5H5P2 479 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 LYNX1G3V0Z9 82 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 CDC14BO60729 498 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 EIF3GO75821 320 aaKnown RBP eCLIP9.36□□□□□ -0.91
APTX-209ENST00000460940 OR2A4O95047 310 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 PTBP3O95758 552 aaKnown RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 LYNX1P0DP58 116 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 RAB3BP20337 219 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 USF1P22415 310 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 COL8A2P25067 703 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 GPR6P46095 362 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 VEGFCP49767 419 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 OR12D2P58182 307 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 DEFA5Q01523 94 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 DOK3Q7L591 496 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 LHFPL3Q86UP9 236 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 PXT1Q8NFP0 134 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 SEMA6DQ8NFY4 1073 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 GLYATL2Q8WU03 294 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 TIMD4Q96H15 378 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 OR2A7Q96R45 310 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 ZNF649Q9BS31 505 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 PAPOLGQ9BWT3 736 aaKnown RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 BPESC1Q9GZL8 116 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 TINAGL1Q9GZM7 467 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 PPP1R3CQ9UQK1 317 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 MPC1Q9Y5U8 109 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 TEP1Q99973 2627 aaKnown RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 ZNF469Q96JG9 3925 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 ZNF816-ZNF321PA0A0X1KG74 233 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 LRRC30A6NM36 301 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 H0YL77 283 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 J3QLW9 94 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 GSTZ1O43708 216 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 KDM4BO94953 1096 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 HTR3BO95264 441 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 ZNF19P17023 458 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 PVALBP20472 110 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 ACKR3P25106 362 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 CCR9P51686 369 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 SEC61A1P61619 476 aaKnown RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 PITPNAQ00169 270 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 WDR38Q5JTN6 314 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 HAGHLQ6PII5 290 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 Q6ZSR3 168 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 TMUB2Q71RG4 321 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 OR2G2Q8NGZ5 317 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 OR8S1Q8NH09 359 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 PELI1Q96FA3 418 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 FAM71F1Q96KD3 344 aaPredicted RBP9.36□□□□□ -0.91
APTX-209ENST00000460940 C20orf85Q9H1P6 137 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 GCM1Q9NP62 436 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 TMEM106BQ9NUM4 274 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 SLC22A13Q9Y226 551 aa9.36□□□□□ -0.91
APTX-209ENST00000460940 RHBDD3Q9Y3P4 386 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms