RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TMEM242Q9NWH2 141 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 DKKL1Q9UK85 242 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 SLC7A11Q9UPY5 501 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 ZNF318Q5VUA4 2279 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 NPIPB13A6NJU9 1138 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 NPIPB4C9JG80 1138 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 CELA2BP08218 269 aaPredicted RBP13.49□□□□□ -0.25
SSR4-206ENST00000460616 FUT3P21217 361 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 CCL1P22362 96 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 CD200P41217 278 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 OR1D4P47884 311 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 TAF9Q16594 264 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 ZNF542PQ5EBM4 170 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 NAXEQ8NCW5 288 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 OR6X1Q8NH79 312 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 ACTR3CQ9C0K3 210 aaPredicted RBP13.49□□□□□ -0.25
SSR4-206ENST00000460616 CHST11Q9NPF2 352 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 PI4KAP42356 2102 aa13.49□□□□□ -0.25
SSR4-206ENST00000460616 GEMIN2O14893 280 aaKnown RBP13.48□□□□□ -0.25
SSR4-206ENST00000460616 TNFP01375 233 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 FCGR2AP12318 317 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 HOXA6P31267 233 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 CDAP32320 146 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 RND2P52198 227 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 H3F3AP84243 136 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 THEM4Q5T1C6 240 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 SLC16A14Q7RTX9 510 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 C9orf40Q8IXQ3 194 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 ZNF283Q8N7M2 679 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 OR4D5Q8NGN0 318 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 LIN37Q96GY3 246 aaPredicted RBP13.48□□□□□ -0.25
SSR4-206ENST00000460616 COL25A1Q9BXS0 654 aaPredicted RBP13.48□□□□□ -0.25
SSR4-206ENST00000460616 SLC2A9Q9NRM0 540 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 LANCL2Q9NS86 450 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 OR14J1Q9UGF5 321 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 WDR87Q6ZQQ6 2873 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 IGSF23A1L1A6 192 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
SSR4-206ENST00000460616 TMEM150CB9EJG8 249 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 RER1O15258 196 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 PITX3O75364 302 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 OPRM1P35372 400 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 TLE4Q04727 773 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
SSR4-206ENST00000460616 WDR5BQ86VZ2 330 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 TMEM234Q8WY98 164 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 SYT3Q9BQG1 590 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 ATG101Q9BSB4 218 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 FAAP24Q9BTP7 215 aa13.48□□□□□ -0.25
SSR4-206ENST00000460616 PHF1O43189 567 aaPredicted RBP13.47□□□□□ -0.25
SSR4-206ENST00000460616 AMBPP02760 352 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 COX5BP10606 129 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 SFTPCP11686 197 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 FOLR1P15328 257 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 NOVA1P51513 510 aaKnown RBP13.47□□□□□ -0.25
SSR4-206ENST00000460616 RNF4P78317 190 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
SSR4-206ENST00000460616 CYB5R2Q6BCY4 276 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 CADM4Q8NFZ8 388 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 TMEM171Q8WVE6 324 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 DDA1Q9BW61 102 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 PLEKHF2Q9H8W4 249 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 PPP1R14DQ9NXH3 145 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 ADAMTS9Q9P2N4 1935 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 MSTNO14793 375 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 THEGLP0DJG4 465 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 CD27P26842 260 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 APLNRP35414 380 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 RAB11AP62491 216 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 TNFRSF9Q07011 255 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 MFAP5Q13361 173 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 SLC10A1Q14973 349 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 SLC35G3Q8N808 338 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
SSR4-206ENST00000460616 CABLES2Q9BTV7 478 aa13.47□□□□□ -0.25
SSR4-206ENST00000460616 MRPL13Q9BYD1 178 aaKnown RBP13.47□□□□□ -0.25
SSR4-206ENST00000460616 TRBV24-1A0A075B6N3 115 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 ONECUT2O95948 504 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 CYB5R3P00387 301 aaPredicted RBP13.46□□□□□ -0.25
SSR4-206ENST00000460616 HBE1P02100 147 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 ZNF133P52736 654 aaPredicted RBP13.46□□□□□ -0.25
SSR4-206ENST00000460616 CLRN1P58418 232 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 PNRC1Q12796 327 aaPredicted RBP13.46□□□□□ -0.25
SSR4-206ENST00000460616 CDCP2Q5VXM1 449 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 CMTM1Q8IZ96 169 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 OR10G4Q8NGN3 311 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 OR5C1Q8NGR4 320 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 OR11L1Q8NGX0 322 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 KLHL13Q9P2N7 655 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 HS3ST3A1Q9Y663 406 aa13.46□□□□□ -0.25
SSR4-206ENST00000460616 A0A1B0GU03 582 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 C2orf72A6NCS6 295 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 ZNF732B4DXR9 585 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 E9PLN8 166 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 MDKP21741 143 aaPredicted RBP13.46□□□□□ -0.26
SSR4-206ENST00000460616 G0S2P27469 103 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 ZNF880Q6PDB4 577 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 MEX3BQ6ZN04 569 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms