RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 MEPCEQ7L2J0 689 aaKnown RBP9.42□□□□□ -0.9
LMCD1-206ENST00000456506 RTN4RL2Q86UN3 420 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 CATSPERDQ86XM0 798 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 EGFL6Q8IUX8 553 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 SLC35F2Q8IXU6 374 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 ABHD12Q8N2K0 398 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 OSR2Q8N2R0 312 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 CORO2AQ92828 525 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 P2RX4Q99571 388 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 RBFOX1Q9NWB1 397 aaKnown RBP9.42□□□□□ -0.9
LMCD1-206ENST00000456506 CLN6Q9NWW5 311 aa9.42□□□□□ -0.9
LMCD1-206ENST00000456506 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.42□□□□□ -0.9
LMCD1-206ENST00000456506 IGKV1-9A0A0C4DH69 117 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 TRBV2A0A0J9YWF9 115 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A18PA6NE21 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A16PA6NEW6 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A20PA6NIJ5 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A9PA6NNJ1 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A12PA8MX19 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A5PA8MXJ8 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 INMTO95050 263 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A15PP0C7V4 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A13PP0C7W8 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A14PP0C7W9 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FAM90A24PP0C7X0 464 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 ANXA8P13928 327 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 BCL3P20749 454 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FASP25445 335 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 PEX2P28328 305 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 DUSP1P28562 367 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 FUT6P51993 359 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 RPL23AP62750 156 aaKnown RBP9.41□□□□□ -0.9
LMCD1-206ENST00000456506 ATP6AP1Q15904 470 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 TPTE2P1Q5T6R2 138 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 PRSS35Q8N3Z0 413 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 EMG1Q92979 244 aaKnown RBP9.41□□□□□ -0.9
LMCD1-206ENST00000456506 CENPNQ96H22 339 aaPredicted RBP9.41□□□□□ -0.9
LMCD1-206ENST00000456506 AKR1E2Q96JD6 320 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 MNTQ99583 582 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 GTF2A1LQ9UNN4 478 aa9.41□□□□□ -0.9
LMCD1-206ENST00000456506 LSM4Q9Y4Z0 139 aaKnown RBP9.41□□□□□ -0.9
LMCD1-206ENST00000456506 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 IGKV1-12A0A0C4DH73 117 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 FAM172BPA6NC97 362 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 LEUTXA8MZ59 168 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 E9PQ18 207 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 H3BSH0 61 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 BUB1B-PAK6H3BSN5 160 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 IGKV1D-12P01611 117 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 CGB3P0DN86 165 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 CGB7P0DN87 165 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 GABRR1P24046 479 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 CDK2P24941 298 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 LMO1P25800 156 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 EPHA2P29317 976 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 BRS3P32247 399 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 DAPP51397 102 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 ISL1P61371 349 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 ODF4Q2M2E3 257 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 SPIN3Q5JUX0 258 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 OGFRL1Q5TC84 451 aaPredicted RBP9.4□□□□□ -0.9
LMCD1-206ENST00000456506 SLX4IPQ5VYV7 408 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 NXNL2Q5VZ03 156 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 C12orf73Q69YU5 71 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 OR2W3Q7Z3T1 314 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 RNF144BQ7Z419 303 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 ZNF329Q86UD4 541 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 Q8IYB0 196 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 ENTHD1Q8IYW4 607 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 FAM58AQ8N1B3 248 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 DNAAF1Q8NEP3 725 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 COQ2Q96H96 371 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 ZNF556Q9HAH1 456 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 TAS2R3Q9NYW6 316 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 SLC7A11Q9UPY5 501 aa9.4□□□□□ -0.9
LMCD1-206ENST00000456506 PSMB11A5LHX3 300 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 H0YJX3 145 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 GATBO75879 557 aaKnown RBP9.39□□□□□ -0.91
LMCD1-206ENST00000456506 RPP14O95059 124 aaKnown RBP9.39□□□□□ -0.91
LMCD1-206ENST00000456506 CCDC159P0C7I6 412 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 CALCBP10092 127 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 KIR3DL2P43630 455 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 GLIPR1P48060 266 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 C17orf58Q2M2W7 97 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 OR52W1Q6IF63 320 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 C8orf86Q6ZUL3 223 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 ZNF596Q8TC21 504 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 TMEM163Q8TC26 289 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 NRG4Q8WWG1 115 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 DNAJC9Q8WXX5 260 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 ADAT3Q96EY9 351 aaPredicted RBP9.39□□□□□ -0.91
LMCD1-206ENST00000456506 NRBF2Q96F24 287 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 GPR61Q9BZJ8 451 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 HMG20AQ9NP66 347 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 C8orf4Q9NR00 106 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 PAPOLBQ9NRJ5 636 aaKnown RBP9.39□□□□□ -0.91
LMCD1-206ENST00000456506 PCDHGB5Q9Y5G0 923 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
LMCD1-206ENST00000456506 A0A1W2PPI3 338 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms