RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 RAC3P60763 192 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM267Q0VDI3 215 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF718Q3SXZ3 478 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 FBXO27Q8NI29 283 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 MARCH4Q9P2E8 410 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 HSF4Q9ULV5 492 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 URGCP-MRPS24S4R325 110 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 C17orf51A8MQB3 221 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SMPD2O60906 423 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 HIST1H1DP16402 221 aaKnown RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 NRN1LQ496H8 165 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PNKDQ8N490 385 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CYB561A3Q8NBI2 242 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 OR10AG1Q8NH19 301 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SLAMF6Q96DU3 332 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 GPR84Q9NQS5 396 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PIAS3Q9Y6X2 628 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TRAV27A0A087WT01 109 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CDC14BO60729 498 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 S100A4P26447 101 aaKnown RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CD38P28907 300 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 HOXC5Q00444 222 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 NR0B2Q15466 257 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ACER2Q5QJU3 275 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 MARCH8Q5T0T0 291 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 RSPO2Q6UXX9 243 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 GPR35Q9HC97 309 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 TIMM8BQ9Y5J9 83 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 V9GYH0 126 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 KBTBD11-OT1A0A1B0GTJ5 212 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CAPZBP47756 277 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CLDN17P56750 224 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PCBP3P57721 371 aaKnown RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 RUNX3Q13761 415 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CLDN23Q96B33 292 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 BOCQ9BWV1 1114 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 KLF16Q9BXK1 252 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CHST5Q9GZS9 411 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 FBXL17Q9UF56 701 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 PRSS50Q9UI38 385 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 MELTFP08582 738 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SCGB1D4Q6XE38 83 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CELF2-AS1Q8N7Q2 184 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 OR52B4Q8NGK2 314 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 ERGIC1Q969X5 290 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 DERL3Q96Q80 235 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 CITED1Q99966 193 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 MRPL32Q9BYC8 188 aaKnown RBP4.67□□□□□ -1.66
CSMD3-204ENST00000455883 FTSJ1Q9UET6 329 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 SLC17A4Q9Y2C5 497 aa4.67□□□□□ -1.66
CSMD3-204ENST00000455883 HELTA6NFD8 242 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 SH2D7A6NKC9 451 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-204ENST00000455883 H7C1H1 209 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 HMGN4O00479 90 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 GZMHP20718 246 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 OR5C1Q8NGR4 320 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 TMIGD2Q96BF3 282 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 WDR89Q96FK6 387 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-204ENST00000455883 GABRG3Q99928 467 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 A0A087WUJ7 227 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 HMX2A2RU54 273 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 OR2W5A6NFC9 320 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 H0YGG7 62 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 LINC00614P0C842 121 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF252P-AS1Q0IIN9 211 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 PAQR6Q6TCH4 344 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 LIAT1Q6ZQX7 453 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM130Q8N3G9 435 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 AQP10Q96PS8 301 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 PIPOXQ9P0Z9 390 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 TUSC2O75896 110 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 HLA-DRB1P01911 266 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 FOLR2P14207 255 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 GABRA1P14867 456 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 HYAL2Q12891 473 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 OR10D4PQ8NGN7 298 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 A8MUA0 341 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 LINC00587B1AMM8 73 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 Q6ZSR9 355 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 PEX11GQ96HA9 241 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 SLC7A10Q9NS82 523 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 WBP1LQ9NX94 342 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 ING1Q9UK53 422 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-204ENST00000455883 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.66□□□□□ -1.66
CSMD3-204ENST00000455883 FXYD1O00168 92 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 CRYAAP02489 173 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 PPBPP02775 128 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 SLC38A11Q08AI6 406 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 XAF1Q6GPH4 301 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 CTU1Q7Z7A3 348 aaKnown RBP4.66□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM217Q8N7C4 229 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 OR6X1Q8NH79 312 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 CLCF1Q9UBD9 225 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 KCNK7Q9Y2U2 307 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 TCRBV5S2A0A599 114 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 H0Y980 276 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 PPP1R8Q12972 351 aaKnown RBP4.66□□□□□ -1.66
CSMD3-204ENST00000455883 MICBQ29980 383 aa4.66□□□□□ -1.66
CSMD3-204ENST00000455883 CGB2Q6NT52 195 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms