RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 C2CD4CQ8TF44 421 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 MRGPRFQ96AM1 343 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 C2orf50Q96LR7 162 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 SYT3Q9BQG1 590 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 EIF5A2Q9GZV4 153 aaKnown RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 OBP2BQ9NPH6 170 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 LIPGQ9Y5X9 500 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 SYNGR3O43761 229 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 ONECUT2O95948 504 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 FABP1P07148 127 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 HOXD4P09016 255 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 JMJD6Q6NYC1 403 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 RPUSD3Q6P087 351 aaKnown RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 SLC16A13Q7RTY0 426 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 TMEM230Q96A57 120 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 FER1L6-AS2Q96M78 137 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 TAF9BQ9HBM6 251 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 MUC6Q6W4X9 2439 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 NME2P1O60361 137 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF273Q14593 569 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 FAM76BQ5HYJ3 339 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 RGS7BPQ6MZT1 257 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 STOML3Q8TAV4 291 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 C1orf147Q96MC9 270 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-213ENST00000454468 GHRLQ9UBU3 117 aa10.37□□□□□ -0.75
SMPD4-213ENST00000454468 IGKV1-12A0A0C4DH73 117 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 RNF222A6NCQ9 220 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 SLC22A20A6NK97 555 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 SYNGR1O43759 233 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 NEURL1O76050 574 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 IGKV1D-12P01611 117 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 FABP6P51161 128 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 GNMTQ14749 295 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 TRIP6Q15654 476 aaKnown RBP10.36□□□□□ -0.75
SMPD4-213ENST00000454468 HIST3H3Q16695 136 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 RTBDNQ9BSG5 229 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-213ENST00000454468 FAM86C1Q9NVL1 165 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 FOXD3Q9UJU5 478 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-213ENST00000454468 MED13LQ71F56 2210 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 ABCA4P78363 2273 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 TRGV5A0A0B4J1U4 118 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 H0YIZ8 118 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 ATG12O94817 140 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 SLC34A2O95436 690 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 MELTFP08582 738 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 FUT3P21217 361 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 AADACP22760 399 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 MPGP29372 298 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 PPT1P50897 306 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 MYPOPQ86VE0 399 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-213ENST00000454468 ZDHHC23Q8IYP9 409 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 ZFP82Q8N141 532 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 C20orf24Q9BUV8 137 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 DCAF16Q9NXF7 216 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 M0R036 132 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 AGFG2O95081 481 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 SOX8P57073 446 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 B3GALT5-AS1P59052 145 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 FLI1Q01543 452 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF766Q5HY98 468 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 ATRAIDQ6UW56 229 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 CD300LFQ8TDQ1 290 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 ARL11Q969Q4 196 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 DUSP13Q9UII6 198 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 RNF150Q9ULK6 438 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 DSPP15924 2871 aaKnown RBP10.36□□□□□ -0.75
SMPD4-213ENST00000454468 BOD1L1Q8NFC6 3051 aa10.36□□□□□ -0.75
SMPD4-213ENST00000454468 KRBOX1C9JBD0 128 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 F8VVB4 439 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 F8VWA3 439 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 GPR31O00270 319 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 FCGR3AP08637 254 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 OR8U9P0C7N5 309 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 ACP1P24666 158 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 CALCRP30988 508 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 CD80P33681 288 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 DEFB109BQ30KR1 87 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 Q3ZCU0 254 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 OVCH2Q7RTZ1 564 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 MARS2Q96GW9 593 aaKnown RBP10.35□□□□□ -0.75
SMPD4-213ENST00000454468 Q96M66 194 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF552Q9H707 407 aaPredicted RBP10.35□□□□□ -0.75
SMPD4-213ENST00000454468 PDCD6O75340 191 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 CST7O76096 145 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 DKK1O94907 266 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 CAMLGP49069 296 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 MEOX2P50222 304 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 RBM39Q14498 530 aaKnown RBP10.35□□□□□ -0.75
SMPD4-213ENST00000454468 AADACL3Q5VUY0 350 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 BVESQ8NE79 360 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 TRAPPC2LQ9UL33 140 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 PPP1R3CQ9UQK1 317 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 KLF13Q9Y2Y9 288 aaPredicted RBP10.35□□□□□ -0.75
SMPD4-213ENST00000454468 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
SMPD4-213ENST00000454468 WDR1O75083 606 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 IGHV3-13P01766 116 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms